Ricinus communis (castor bean): 8277174
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Entry
8277174 CDS
T01087
Name
(RefSeq) far upstream element-binding protein 1 isoform X4
KO
K13210
far upstream element-binding protein
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8277174
03041 Spliceosome [BR:
rcu03041
]
8277174
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
8277174
Spliceosome [BR:
rcu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
8277174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_KhpA-B
KH-I_KHDC4-BBP
KH_2
Motif
Other DBs
NCBI-GeneID:
8277174
NCBI-ProteinID:
XP_002525522
UniProt:
B9SHQ3
LinkDB
All DBs
Position
2:complement(11758666..11765602)
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AA seq
798 aa
AA seq
DB search
MAEEEVVVAAATANATNTNTSPVASDHNKRKLQDLEPEEAQAPAEANPSDDANKKSDDVA
EGDTQEAKRLRTVDENKSDGLASENGIGKDKPEGGQEKSDKDEQEEEDVNAQETVGKGEE
PANADDNDTVDNDTKEAASVGDSKKDADDNDTVDNDIKEAASVGDSKKDDATEKQQEADE
ETARPPEEESEPESDDAQTTSRKMEVPNDKVGVLIGKGGDTIRYLQYNSGAKIQITRDMD
ADPHSTTRPVELIGTLSSISKAEKLINAVIAEADAGGSPSLVARGLPSAQTAGVGDQIEM
QVPNEKVGLIIGRGGDTIKALQAKSGARIQLIPQHPPEGDASKERTVRVTGDRKQIEIAR
EMIKDVMSQNVRLSPLSGGYNQQQSYRPRGPTGPSHWGPRGPHSSQPSPYDYHHRGPYPS
QNSQYPPPSYGGYPPQHMGPRGNFGSGWEQRPPNMQGPVSHGGGYDYYGGQGGHVPDHPS
SAPISNPITGHATGPSPTPGMGHPPSQANYNYGQQHGPDYGHQAPYSQAVSQHGYGHGYD
EPKYDSHAQTQHPYGHGNPQPVYPQASNQPGYGAQQQYGKQPSYGMLPQGPPQSYGPPRP
GQPGDMPYQAPNPSSQSYGSNVPPQQQYPYASSGPMQQAYPSYGAPSATDGYNQGLPASV
PGYPQQAGQSVASYGQPGGQQASAYVQGPSGGYGSYPSSQQAYPEQPAQNSAGYGYQGSQ
DPAYATGPGSAYAAPASGQQGYAQPTPTQPSYDQSVPQSTAYAAAAPPASAPVSYGKTVS
PQPGYPQYDSTQMYAAPR
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaagaggttgttgtggcagcggcgacggcgaatgcgactaatactaataca
agtccagttgcatcggatcataacaaacggaagcttcaagatttagagcctgaagaagct
caagcaccggccgaggctaaccctagcgacgatgcgaataagaaatctgatgacgtggca
gaaggtgacacgcaggaggccaagaggttaagaacggtcgatgagaataaatctgatggc
ttagcaagtgagaatggtattggaaaagacaaaccggagggtggtcaagagaaaagtgat
aaggatgagcaggaagaggaggacgttaatgctcaagaaacagtaggtaaaggagaagaa
ccagcgaatgcagatgataatgacacagttgataatgatactaaagaggctgcttctgtt
ggggattctaagaaagatgcagatgataacgacacagttgataatgatattaaagaggct
gcttctgttggggattccaagaaagatgacgctactgagaagcaacaggaagcagatgaa
gaaactgcccgacctcctgaggaggaatctgaacctgaatctgatgatgctcaaactact
tcacggaaaatggaggttcctaatgataaggttggagttcttattggcaagggtggagat
acaatacgttatctgcagtataattctggggcaaaaattcaaattacaagggatatggat
gctgatccgcattccacaacaaggccagtggaattaatagggactttaagcagtataagc
aaggctgagaagctcattaatgctgtcatagcagaggcggatgctggtggttccccttcc
cttgtagctagaggccttcctagtgcacagactgctggagtgggagatcaaattgagatg
caagtacccaatgagaaggttgggttgatcataggcagaggaggggacaccattaaagct
ctccaagccaaatcaggggcacgcattcagttgatacctcaacatcctccagaaggggat
gcatctaaagaaaggacagtgcgagtgaccggtgatagaaagcaaattgagattgcaaga
gaaatgataaaggatgtcatgagtcagaatgtgaggctatcacccctctctggcggttat
aaccagcagcaatcgtatcgaccccgtggacctaccggtccatctcactggggtcctcga
ggtccccactcatcccagcctagtccttacgattatcatcatcgaggaccatatccatcc
caaaattcgcagtatccacctcctagttatggtggttatcctccacagcatatgggtcca
agaggtaacttcggttctggttgggagcaaagacctcccaacatgcaggggccagtttcg
catgggggtggctatgattattatggtggccaaggaggtcatgtacctgatcacccatca
tctgctccaatttctaatcctatcactgggcatgctacaggcccctcccctactcctgga
atgggccatcctccatcacaagcaaattataattatggacagcaacatggtccggattat
gggcatcaagctccttattcccaggcggtgtctcagcacggctatgggcatggatatgat
gaaccgaagtatgatagtcatgcgcagacgcagcatccgtatggacatggaaatcctcaa
ccagtttacccgcaggccagcaaccaacctggctatggggctcagcagcagtatggaaag
caaccatcctatggcatgctgcctcagggaccacctcaatcgtatggtcctcctaggcct
ggtcaaccaggagatatgccttatcaagccccgaatccatccagccaatcttatggttca
aatgtgccacctcaacagcagtatccatatgcatcaagcggacccatgcagcaagcatat
ccttcatatggagctccatcagctactgatgggtataaccaaggattgcctgcttctgtc
cctggctatcctcagcaagctggccaatcagttgcatcatatggtcaacctggtggacag
caggcatctgcttatgtgcaaggtccatccggtggttatggatcatatccatcttcacaa
caagcttacccagagcagccagctcaaaacagtgcaggttacgggtatcaagggtctcaa
gatcctgcttatgccaccggccctggttcagcatatgctgcaccagctagtggtcagcaa
ggttatgctcaaccaacgccaactcaaccaagctacgatcagtcagttccacagtcaact
gcttatgctgctgctgcccccccagcaagtgcgccagttagctatgggaaaactgtctct
ccccagcctggttatcctcaatatgactcgacccagatgtacgctgctccacgttga
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