Ricinus communis (castor bean): 8277205
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Entry
8277205 CDS
T01087
Name
(RefSeq) chaperonin 60 subunit alpha 2, chloroplastic isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
8277205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8277205
03110 Chaperones and folding catalysts [BR:
rcu03110
]
8277205
03029 Mitochondrial biogenesis [BR:
rcu03029
]
8277205
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rcu04147
]
8277205
Enzymes [BR:
rcu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
8277205
Messenger RNA biogenesis [BR:
rcu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
8277205
Chaperones and folding catalysts [BR:
rcu03110
]
Heat shock proteins
HSP60 / Chaperonin
8277205
Mitochondrial biogenesis [BR:
rcu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
8277205
Exosome [BR:
rcu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
8277205
Exosomal proteins of other body fluids (saliva and urine)
8277205
Exosomal proteins of breast cancer cells
8277205
Exosomal proteins of colorectal cancer cells
8277205
Exosomal proteins of bladder cancer cells
8277205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
8277205
NCBI-ProteinID:
XP_002528171
LinkDB
All DBs
Position
4:complement(15683448..15690834)
Genome browser
AA seq
576 aa
AA seq
DB search
MSFCLSVSTPIIFSIKPFFSMFNGKKRTVSKLVVKAGPKRICFDKECREALQSGIDKLAD
AVSVTLGPRGRNVVLSDSKTLKVVNDGVTIARAIELSDTMENAGAMLIQEVANKMNDLAG
DGTTTAIILARAMIKMGLLAVAFGANPVSLRKGLDMTIKELVEVLKEKSVSVIGRDNIKA
VASISAGNNEFVGNLIAETIDKIGNDGVISIESSSTSETYVIIEEGMKIDKGYMSPQFIT
NQEKSLVEFDNARVLVTDQRIATVKEIVPLLEKTMQLSVPLLIFAEDMSKQVLETLVVNK
MQGLLNVAVVKCPGFGEGKKALLQDIALMTGADFLSGDFGLTLMGATSDQLGIAQKVTIT
SNSTTIVADSSTKAEIQARILQMKKDLAETDNKYLSRKLSERIAKLSGGVALIKVGAHTE
TELEDRKLRIEDAKNATYAAMDEGIVPGGGAAYVHLSEQISTIQDSMEDENEQIGADIVA
KALLVPAKTIATNAGVDGAVVVEKIRSSDWRIGFNAMTGEYEDLLDAGVVDPCRVSRCAL
QSAASIAGLVLTTQAILVERTKKPKPAVPHVPGITP
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgtctttttgtctttctgtatcaacaccaattattttttctataaaacctttcttctct
atgtttaatggaaagaaaaggacagtaagtaaattggtagtaaaagcagggcccaaaagg
atttgctttgacaaagaatgcagagaagctttgcaatctggaattgataagctagctgac
gctgtttctgtcaccttaggacctagaggacgtaatgttgttctttctgattctaagaca
ttaaaagtagtgaacgatggtgttacaatagctcgagccatagagctttcagatacaatg
gagaatgctggagcaatgctaatccaagaggttgcaaataaaatgaatgatttggctggt
gatggtactacaactgcaatcattttggctcgtgcaatgatcaaaatgggcctgttagca
gttgcttttggggccaaccctgtttctttaaggaaaggattagatatgactataaaagaa
ttagttgaagtcttgaaggagaaaagtgtttcagtgataggaagggataacattaaagcg
gttgcttccatctctgctgggaataatgaatttgttgggaacttaattgcggagactatt
gacaagattggcaatgatggagtaatctcaattgaatcatcttcgacctctgaaacttat
gtgatcatagaagaaggaatgaagattgataagggctacatgtctccccagttcataaca
aaccaggaaaaatctctggtagagtttgacaatgccagggtactagtaactgatcaacgg
attgcaactgtcaaagaaatcgtccctttgttggaaaagactatgcaattgagtgtccca
ctgttaatctttgctgaggatatgtcaaagcaggtactggaaacactagtggtgaacaaa
atgcaaggtttattgaatgttgctgttgtcaaatgccctggatttggagagggaaagaag
gctttattgcaagacattgcccttatgacaggtgccgattttctttctggagattttggt
ctgactctcatgggcgcaacctcagatcaacttggcattgcacagaaagttaccataaca
agtaactcaacaaccatagttgctgactcttctaccaaagccgaaattcaagctagaatt
cttcagatgaagaaggaccttgctgaaacagataataaatacttgtcaagaaagctctca
gaaagaattgccaaattgtctggtggcgtggctctaatcaaggtaggagcgcatacagaa
acagaacttgaagataggaaactcaggattgaggatgcaaagaatgcaacttatgctgcc
atggatgaagggatagtacctggtggtggtgctgcatatgtacatctctcagagcagatt
tccaccatacaggattcaatggaagatgaaaatgagcagattggtgctgacattgtggca
aaggcacttcttgtacctgcaaaaacaattgcaactaatgctggggttgatggagcagtt
gttgtggagaaaataagatcttcagactggagaatcggtttcaatgcaatgactggtgaa
tacgaagatcttttggacgcaggggtggtagatccttgtagggtttcacgatgtgcactt
cagagtgctgcatcaattgctggactagttctaacaactcaagctatattggtggaaaga
acaaagaagcctaagcccgctgttcctcatgttcctggaataacaccatag
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