Ricinus communis (castor bean): 8277223
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Entry
8277223 CDS
T01087
Name
(RefSeq) coatomer subunit beta'-2 isoform X1
KO
K17302
coatomer subunit beta'
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcu04131
]
8277223
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rcu04147
]
8277223
Membrane trafficking [BR:
rcu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
8277223
Exosome [BR:
rcu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
8277223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_IFT140_1st
PEP5_VPS11_N
NBCH_WD40
Beta-prop_HPS5
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
WD40_like
Beta-prop_Nup120_160
WD_LRWD1
TPR_8
Beta-prop_DCAF12
TPR_2
TPR_CcmH_CycH
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
8277223
NCBI-ProteinID:
XP_002528189
UniProt:
B9SQC0
LinkDB
All DBs
Position
8:9501887..9514507
Genome browser
AA seq
914 aa
AA seq
DB search
MPLRLEIKRKLAQRSERVKSVDLHPTEPWILVSLYSGTVCIWNYQSQTMAKSFEVTELPV
RSAKFIARKQWVVAGADDMFIRVYNYNTMDKIKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWVCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIIITGSEDGTVRLWHSTTYRLENTLNYGLERVWAVGYMKGSRRIVIGYDEGTIMVKIG
REEPVASMDNSGKIIWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEYAVRESTSKIKIFSKNFQ
EKRSVRPTFSAERIFGGTLLAMCANDFICFYDWAECRLIRRIDVTVKNLYWADSGDLVAI
ASDTSFYILKYNRDLVSSYLDSGRPVDEQGVEDAFELLHETNERVRTGLWVGDCFIYNNS
SWRLNYCVGGEVTTMYHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVM
RGDLERANELLPSIPKEHHNSVARFLESRGMIENALEVATDPDYKFELAIQLGRLEIAKE
IATEVQSESKWKQLGELAISTGKLEMAEECMKRATDLSGLLLLYSSLGDAEGISKLAPLA
KEQGKNNVAFLCLFMLGKLEDCLQILVESNRIPEAALMARSYLPSKVPEIVALWRKDLNK
VNPKAAESLADPDEYPNLFDDWQVALSVETRVAETRGVYPPAEEYLNHADRTNITLVEAF
RNMQVEEPLENGDYDHEAAEQNGEEQIIEEHNGEEGSQEEAVVVDADSTDGAVLVNGNEA
EEEWGTNNEGTPSA
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcagacttgaaattaagaggaaacttgctcaaagatcagagagagtaaaatct
gtggatctacatccaacagaaccatggattctagtgagtctttattcagggactgtttgt
atctggaactaccaatctcagactatggcaaaatcttttgaggtcacagagttaccagtt
agatcagctaagtttattgcacgaaagcagtgggttgttgctggagctgatgacatgttt
atccgtgtgtacaactacaatacaatggataagattaaagtgtttgaggcacatacagat
tacattagatgtgttgctgtccatcctacccttccatatgtcctgtcatcatctgatgat
atgctcatcaagctttgggattgggagaagggttgggtgtgtacgcagatatttgaggga
cattcccattatgtgatgcaagtgacctttaatccaaaggacacaaacacttttgcaagt
gcatcccttgatcgtaccataaagatttggaatcttggctctcccgacccaaattttact
ctggatgcccatcagaaaggagtaaattgtgttgattactttactggcggtgataagcct
tatctaattactggttctgatgatcacactgctaaggtgtgggactatcaaaccaaaagt
tgtgtccagacactagaaggccatactcataatgtctctgcagtatgtttccatccagaa
cttcctataataatcactggttctgaggatgggacagttcgcttgtggcattcaacaact
tacaggctcgagaacacattgaattatggtcttgaaagagtttgggctgttggatacatg
aaaggctcacgtcgcattgtgattggttatgatgaaggaaccattatggtcaaaattggt
cgagaagaacctgtggctagtatggataacagtggaaagattatatgggctaaacacaat
gaaattcaaactgtgaacattaagagcgtgggagcagattttgaggttactgatggagaa
aggttgcctttggctgtcaaggagttgggaacatgtgatctttatccacaaagtttaaag
cacaatcccaatgggagatttgttgtcgtctgtggggatggtgagtacatcatatataca
gctttagcatggaggaatagatcatttggttctgcactggagttcgtttggtcatcggac
ggagaatatgctgtcagagagagtacatcaaagattaaaatttttagtaagaatttccag
gaaaagaggagtgttcgaccaacattttctgctgagcgtatttttggaggaactctgttg
gcaatgtgtgcaaacgacttcatttgtttttatgattgggctgaatgcaggttgattagg
aggattgatgttactgtaaaaaatctttattgggctgatagtggtgatttggtggcaatt
gctagtgacacatcattctacatcctcaagtacaatcgcgacttagtttcatcttattta
gacagcgggagacctgtggatgaacaaggtgttgaggatgcctttgagcttcttcatgaa
accaatgagcgtgttaggactggtttatgggttggggattgctttatttataacaactct
tcctggagacttaattattgtgttggaggagaggtaaccacaatgtatcatttggaccgc
ccgatgtacttgttgggatatcttgctagtcaaagtcgggtgtatctaatagacaaggag
tttaatgttatggggtacactttacttcttagcttaattgagtacaagactcttgtgatg
cgtggggacctggaaagagccaatgaacttttgccttcaattcctaaagagcatcataat
agtgtggctcgtttcttggaatcacgtggtatgatagaaaatgctctggaggtagctaca
gatcctgattacaaatttgagctagctatacaacttggcagacttgagattgctaaggaa
attgccacagaagtacaaagtgaatcaaaatggaagcagttgggagaattagctatttct
actggaaagttagaaatggctgaggaatgtatgaagcgtgcaacagacttgagcggtttg
ttgcttttatattcttctctaggagatgctgaagggatttcaaaactagcacctctggca
aaagagcaagggaagaacaatgttgcattcctctgtttgtttatgttgggcaaattggaa
gattgcctccagattttggttgaaagtaatcggatacctgaagctgctttaatggctcga
tcctatcttccaagcaaggttccagagattgtagcactttggagaaaagatctaaacaag
gttaacccaaaagctgcagaatctttggccgatcctgatgagtatccaaatttgtttgat
gattggcaagttgctttgtctgttgaaactcgagttgcagagacaaggggtgtttatcct
cccgcagaggaatatttaaaccatgctgacagaacaaacataactcttgtggaggctttc
agaaacatgcaagtagaagaacctcttgaaaatggagattatgatcatgaggctgcagag
caaaatggagaagagcagataatagaagagcacaatggtgaagaagggagccaagaggag
gctgttgtggtggatgctgattctacggatggtgcggtactcgtcaatggaaacgaggct
gaggaagagtggggtacgaataatgaaggaaccccgtcagcctaa
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