Ricinus communis (castor bean): 8277274
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Entry
8277274 CDS
T01087
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
8277274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8277274
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
8277274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
8277274
NCBI-ProteinID:
XP_048225900
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Position
10:510621..515673
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AA seq
478 aa
AA seq
DB search
MEMELGKLFIGGISWDTNEDRLREYFQVFGEVMEAVIMKDRATGRARGFGFVVFADPAVA
ERVVMEKHLIDGRNVEAKKAVPREDQNILNRNSSSSIHGSPSPARTKKIFVGGLASTVTE
SDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLHKTFHELNGKMVEVK
RAVPKELSPGPTRTQLNGYNYGPNRVGSFLSSYTQGYSPNSTGGLGVRMDGRFSPATVGR
SNFSPFGPGFGMGLNYEQGLSPSYGGNSNLSSNLGYGRLSPSYNGNSSRYDSPIGYNGGN
VGNSSVLNSPARTLWGNGTINHSSNSTNSSSFLGSGTGNPGIGSFGSIGALWGSSASSGQ
GGGASSAFSNGSLSYNNGDLSVGLGGIGYGRNSGTSVAPVSSHTASNDGYNGPYGDIYEN
ISLYGDSAWRSSPLELEGSGSFGFGLGNAASDVVTKNSAGYVGGYSVASRQANRGIAA
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggagcttggaaagttattcatcggtgggatttcatgggatacaaatgaagac
cgtctaagggagtacttccaggtctttggcgaagtcatggaagctgtgattatgaaggat
cgtgctacaggtcgtgcccggggctttggttttgttgtttttgcagaccctgctgttgct
gagagggttgtgatggaaaaacacctaatagatggtagaaatgttgaggcaaagaaggca
gtacctagggaggatcaaaacattctgaacagaaacagtagcagcagcatacatggatcg
cctagtccagctcgtactaagaagatatttgtaggaggcttagcatctacagtcacagag
agtgactttaagaagtactttgatcaatttgggacaattacagatgtcgtggttatgtat
gaccacaatactcaacgccctagagggtttggatttattacttatgattcagaagaagca
gtggataaagtgctccataaaaccttccatgaactcaatggtaaaatggttgaggtcaag
cgcgctgtcccgaaagaattatcaccagggccaactcggacccagttaaatgggtataat
tatggtccaaatagagttggtagcttcctgagtagttacactcagggatacagtccaaat
tcaactggaggacttggtgttagaatggatggtaggttcagtcctgctactgttggtcgg
agtaacttttctccatttggtcctggttttgggatggggctaaattatgagcaggggttg
agtcctagttatgggggaaattcaaacctaagttctaaccttggctatgggcgactgagt
ccttcatataatggaaattcaagcaggtatgatagccctattggttataatggaggcaat
gttggaaatagttctgtcttaaattcgccggctcgaactttgtggggtaatgggactatt
aatcattcttcaaactccacaaactctagtagctttttgggctctggaactgggaatcca
ggaataggttcctttggcagtattggagcgctctggggttcatcagctagttctggtcaa
ggtggaggtgccagctccgcctttagcaatggcagccttagctataacaatggtgatctc
agtgttggtctaggagggatagggtatggaagaaatagtgggacaagtgttgcgccagtt
tcatctcatactgcatcaaatgatggctataatggaccttatggagacatttatgagaat
atctcactgtatggggattctgcttggcgatcttcaccgttagagctagagggttctggc
tcatttggcttcgggcttggaaatgcagcttcagatgtcgtgaccaaaaattctgctggt
tatgttggtggttatagtgttgccagtagacaagcaaatagaggaattgcagcttag
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