Ricinus communis (castor bean): 8277354
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Entry
8277354 CDS
T01087
Name
(RefSeq) nuclear pore complex protein NUP155 isoform X1
KO
K14312
nuclear pore complex protein Nup155
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
8277354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8277354
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
8277354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
8277354
NCBI-ProteinID:
XP_002526002
UniProt:
B9SJ33
LinkDB
All DBs
Position
5:11009717..11018604
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AA seq
1490 aa
AA seq
DB search
MSWEEEVVLRDVASAGIAVSDRIGREVASQLDLEEALEASRYVSHPYSTHPREWPPLIEV
GDTWELPPVLIERYNAAGGEGTALCGIFPQIRRAWASVDNSLFLWRFDKWDGQCPEYRGE
EQAICAVGLAKSKPGVFVEAIQYLLVLATPVELILVGVCCSGGGDGTDPYAEISLQALPE
YTVPSDGVTMTCVACTDMGRIFLAGRDGHVYELQYTTGSGWHKRCRKVCLTSGLGSVISR
WVVPNVFKFGAVDPIIEMVFDNERQILYARTEETKLQVFLLGPDGEGPLKKVAEERNLFS
HRDVHYGGRQSTGPRTPSRSAKPSIVSISPLSTLESKWLHLVAVLSDGRRMYLSTSPSIG
NNGTVGGLSRFNQRPNCLKVVTTRPSPPIGVSGGLTFGALASRTPNEDLTLKVETSYYSA
GTLVLSDSSPPTMSSLVIVNRDSTSQSSASGSLGTSTRSSRALREIVSSLPVEGRMLFVA
DVLPLPDTAATVKSLYSELEFFRCESSGESCEKASGKLWARGDLSTQHILPRRRIVVFST
MGLMEVVFNRPVDILRRLFEANSPRSILEDFFNRFGNGEAAAMCLMLAARIVHSETLISN
AIADKAAEIFEDPRVVGMPQLDGMNAVSNTRAATGGFSMGQVVQEAEPVFSGAYEGLCLS
SSRLLFPLWEFPVFVSKGGLVSSGAASESGVITCRLSAAAMKVLESKIRSLEKFLRSRRN
QRRGLYGCVAGLGDVTGSILYGTGSDLGTSDRSMVRNLFGAYSWNVESSAGGTSNKRQRL
PYSPAELAGMEVRAMECIRQLLLRSSEALFLLQLLCQHHVARLVQGFDANLVQALVQLTF
HQLVCSEEGDRMATMLISALMEYYTGPDGRGTVDDISGRLREGCPSYFKESDYKFFLAVE
CLERAAITPDTVEKENLAREAFSSLSKVPESADLRTVCKRFEDLRFYEAVVRLPLQKAQV
LDPAGDAYNDQIDAAIREHARAQRERCYEIISSALRSLKGESLQREFGSPLRPSASRAVL
DQASRRKYISQIVQLGVQSPDRLFHEYLYRTMIDLGLENELLEYGGPDLVPFLQNAGRET
LQEVRAVTAVTSATSSIGHSGAPVTANQAKYFDLLARYYVSKRQHMLAAHILLRLAERRS
TDARDVPTLEQRRQYLSNAVLQAKNASDSGGLVGSMKGALDSGLLDLLEGKLVVLRFQIK
IKDELEAIASRLESSSSMSEPVQNGSVPDNNANPDYAKVAREKAKELSLDLKSITQLYNE
YAVPFELWEICLEMLYFANYTGDTDSSIVRETWARLIDQALSRGGIAEACSVLKRVGSHI
YPGDGAILPLDTLCLHLEKAALERLESGAEPVGDEDVARALLAACKGATEPVLNAYDQLL
SNGAILPSPNLRLRLLQSLLVVLREWAMSVLAQRMGTTTSGASLILGGTFSQEQTTVINQ
GIRDKITSAANRYMTEVKRLPLPQSKTEAVYRGFRDLEESLISPFSFNRF
NT seq
4473 nt
NT seq
+upstream
nt +downstream
nt
atgtcatgggaagaagaggtggtgctccgggacgtggcgagtgcgggtatcgcagtgagc
gaccgcattgggagagaggtagcttctcagctagacctagaagaagctctagaagcttct
agatacgttagccatccttattctacgcaccctagagagtggcctcctttgatcgaggtt
ggagatacatgggagttgccacctgtacttattgagagatataatgcagctggtggtgaa
ggcactgctttatgtggaatttttcctcagattcggagagcctgggcctccgtcgacaat
tctttgtttttatggcgtttcgataagtgggatggacagtgtcctgaatacagaggggag
gaacaagccatttgtgctgttggtcttgccaaatctaaacctggtgttttcgttgaagcc
attcagtatcttttagttttagccactcctgttgagctgattcttgtaggtgtatgctgt
tctggagggggtgatggtactgatccatatgcagagatttcattacaggctttaccagag
tatacagttccatcggatggtgttactatgacttgtgttgcatgtactgatatgggtcgt
atctttctggctgggcgtgacggccatgtttatgagctgcagtacacaactggttctggc
tggcataagaggtgccgtaaggtttgccttacttcagggttgggaagtgtcatctcaagg
tgggttgttccaaatgtatttaagtttggagctgtcgatcccataattgagatggttttt
gacaacgaaagacagatattatatgcacgaactgaggagaccaagcttcaggtttttctt
ctagggccagatggagaaggtccactgaagaaagtggcagaagaaagaaatttattcagt
cacagggatgtacattatggtggtagacagtcaacgggaccaagaacaccaagtagatca
gcaaagccatctatagttagcatatcacctctatccacactggaatccaagtggttgcac
cttgttgccgtattatcggatggcagaaggatgtatctttccacttctccttctatcgga
aataatggtacagttggtggtttgagtcgatttaatcagagaccaaactgtttaaaagtt
gtaacaactaggccctctcctcctataggggtcagtggtggacttacctttggagctctt
gccagtagaactccaaatgaggatctcacactaaaagttgaaacatcatattattctgct
ggaacacttgtcctttctgattcctcaccaccaaccatgtcttctcttgttattgtgaac
agagactcaacctcacaatcatctgcttcaggtagtttaggtacaagcacgaggagttct
cgggctttaagagaaattgtgtcttccttacctgttgaaggtcgaatgctttttgtggca
gatgtcctaccgttgccagatacagctgccactgtgaagtcactgtattcagaacttgaa
tttttcagatgtgagagctcaggggagtcctgtgaaaaggcatctggaaaactttgggct
agaggtgatctttcgacccagcatatacttccaaggcgaagaattgttgtttttagtacc
atgggtttgatggaagtagtttttaacaggcctgtggatattctgaggaggctgtttgag
gccaattcacctagatcaatcttggaagatttcttcaatcgttttggaaatggtgaggca
gctgcaatgtgtttaatgttagctgcaaggattgttcattcagagactcttataagcaat
gctattgctgacaaagcagcagaaatatttgaggatccgagggttgttggcatgccacaa
cttgatggtatgaatgcagtatcaaacactagagcagcgacagggggttttagtatggga
caggttgttcaggaggctgagcctgtgttttcaggtgcatatgaaggcctctgcttgagt
tcatcaaggttactttttcctctgtgggaattccctgtctttgtcagcaaagggggacta
gtttcatctggtgctgcatctgaaagtggcgtaattacttgcagactctctgcagcggct
atgaaggttcttgaaagcaagattcgctctctagagaagttcttgaggtccagaaggaac
caaagaaggggcctttatggctgtgtagctggcttaggagatgtgactggttctatattg
tatggaactggttcagacttaggtactagtgacagaagcatggtgaggaatttatttggt
gcatactcatggaatgtcgagtctagtgctggtgggacatcaaataaaaggcaacgatta
ccctatagtcctgcagaattggctggcatggaggtcagggcaatggagtgtatcaggcag
ttgcttcttcgatctagtgaagctttgtttttgctacagcttctttgtcagcatcatgta
gctcgcttggttcagggatttgatgctaatttagtacaggcactggttcagttaacattt
catcagttagtttgttctgaggaaggtgaccgcatggccacaatgttaatatctgcgcta
atggagtattatactggtccagatggtagaggaacagtagatgatatcagtgggaggtta
cgggagggttgtcctagctatttcaaggagtcagattacaagtttttcttagccgtggaa
tgtcttgaaagagctgctataactccagatactgtagagaaggagaatcttgctagagaa
gccttcagttctttgagcaaagttccagagtctgcagatttaagaactgtttgcaaaagg
tttgaggacttaagattttatgaagctgtggtacgattgcctctgcagaaggcacaggtt
cttgaccctgctggtgatgcttacaatgatcaaattgatgcagcaattagggaacatgca
cgtgctcagcgtgaacggtgctatgagataatttctagtgctttacgttctctgaaaggt
gagtctttgcaaagggagtttggatctcccttgaggccttctgcctcacgagcagtgctt
gatcaggcttcccgaaggaaatatattagccagattgttcagctgggtgtccaatcacct
gacagactgtttcatgagtatctataccggactatgattgatttgggccttgaaaatgag
ctgttggagtatgggggacctgatttagtgccctttctgcaaaatgctggtcgtgaaaca
ttacaagaggtccgagctgttactgcagtaacatctgcaacttcttccattggtcattca
ggagcacccgtcactgctaatcaagcaaaatactttgatcttttagctcggtattatgtc
tcaaagcggcagcatatgcttgcagcccacatattgcttagactggctgagagacgttca
actgatgcaagggatgttcctactcttgaacagaggcgccaatacttgagcaatgctgtt
ctacaggctaagaatgcaagtgatagtggtggtttggtaggttccatgaagggtgccttg
gacagtggattgctggatttacttgaagggaagcttgtggttcttcggtttcaaataaaa
ataaaagatgaactggaggctatagcttccaggttagaatcttcatctagcatgtctgaa
cctgtacaaaatggatcagtccctgataacaatgccaatccagactatgcaaaagttgca
agagaaaaagccaaagagctgtcgctggatttaaaaagcataactcaactatataatgaa
tatgcagttccttttgaactgtgggagatatgcctggagatgctctatttcgcaaattat
actggtgatactgatagcagcattgtaagagaaacctgggctaggttgattgatcaagct
ctttcaaggggtggcattgctgaagcttgttcagtattgaagagggttggttcccacata
tatcctggagatggagctattttaccattagacactctatgtcttcaccttgagaaggct
gctttggagagattggaatcaggggctgaacctgttggagatgaagatgtagcaagagct
ctccttgctgcttgtaagggcgcaactgaaccagtactaaatgcttatgatcagttgtta
tcaaatggagctattttgccctctcccaaccttaggttgcgtcttctccaatcgctgtta
gtggtactccgagaatgggcaatgtccgtgttagcacagaggatgggtacaactacaagc
ggggcttccttaatactaggtggaacattctcacaggagcaaacaacagtcattaaccaa
gggattcgtgataagatcacaagtgcagcaaacaggtacatgacagaggtgaaaaggttg
ccacttccacagagcaagactgaggctgtctaccgaggatttcgagatcttgaagagtct
ttgataagtcctttttcttttaatcgcttctaa
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