Ricinus communis (castor bean): 8277496
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Entry
8277496 CDS
T01087
Name
(RefSeq) KH domain-containing protein HEN4 isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8277496
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
8277496
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
8277496
NCBI-ProteinID:
XP_048232733
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Position
7:complement(5640582..5647353)
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AA seq
721 aa
AA seq
DB search
MQHHRDRRRRPRPTRPPVMLQPGQVAFRVVCHASIIGGLIGRSGSAISQIRRDTGCTVHC
DEQVQGSDHRVITIVGPASPGKRITLNSTTCHDHNGAEEEEKELVSVAQEAVIRVCERMW
EVDGQRERRGGVDNNSNNSGLGEGYCGLLADTTQIGAVVGKGGKNVLRMRRESGADIRFL
PPPHCASKDDQLIQITGSILAVKKALVAVTDCLHDCPPYEKDPTLLMRPLERASHLASSD
PHAEFFPHLSSLLPPLSGNSGTSHPLSSDAGEDPNQDAEAVRHEVSFRLLCSNGAAGSII
GKKGTIVRTLQNETGASIMFAAPMSMSGERVVTISALENLESWHSPAQNAAILVFARSVE
HDIEKGHPSGLIEGATVTARLLVASDAVCCLIEKGGTGNIDSEMIEVSGADIRILDGEQI
MACASEDDVVIEITGEYKNVQNALFMVTGKLRGNLLPSEVLNEKKARSPQGRKVETASPR
LHQPAGLSPDSDQETSLTRAMNQLGFSSSFNNASLPRLQSAQKFQREHTTAIKNQENSLQ
AFGGGSGLERSLHFLLPKEVLNEVGERSSSGGVRQTTSSGSHSSSGLAPGPIQDTSLTRG
INQPQLSNNIDFPSPALHMPQQTAGRGKTFGRGAELESYSRKRSPIVVNTIIELVVPEDT
IGSVYGEDGSNLARLRQISGAKVEVREPSSGKSGRIVVISGTPDQTNAAQSLLQAFILAD
Q
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaccaccgcgaccgccgtagacgcccgcgtcctacgcggcctcccgtcatgctc
caaccaggtcaagtagcattccgagtagtttgccacgcgtccataatcggcggcttgatc
ggccgttcgggctcggctatctctcaaatacggcgagacacagggtgcactgtccactgt
gacgaacaagtgcagggttcagaccaccgtgtgatcacaatagtaggtccagcatctccc
ggaaaaagaatcacgttgaactcaacgacttgtcacgatcataatggggcggaagaggag
gaaaaggaactggtgtcggtggctcaagaggcagtaattagggtttgtgagagaatgtgg
gaagttgatggtcaaagagaaagaagaggaggagtcgataacaatagtaataatagtggt
ctgggcgaaggttattgtggccttttggctgatacgacacaaattggtgccgttgttgga
aaaggagggaagaatgtgttgagaatgaggagagagagtggggcggatattagattcctt
ccacccccacattgtgcttctaaggatgatcaactgattcagattacaggttccattttg
gcagtgaaaaaagcactggttgctgttactgattgtcttcacgattgtccaccatatgaa
aaagacccaacgcttttgatgagaccacttgagagagcttcacatttggcctcttctgat
ccacatgcagaattcttcccacatcttagttcactgttaccacctttaagtggaaattct
ggaacttcccatccattatcctcggatgctggtgaagaccccaaccaggatgcggaagcg
gtacgacacgaagtgtcattcaggctgctttgctccaatggtgcagctgggagcattatt
ggcaagaaaggaaccattgtcagaaccctacaaaatgaaacaggtgcttctatcatgttt
gcagctccaatgtctatgtctggtgaacgtgtagttaccatttctgcgttggagaacctt
gaatcatggcactctcctgcacaaaatgctgctattctcgtctttgctagatctgttgaa
catgacattgaaaaggggcatccatcaggtttgattgagggtgctacagtaactgcaagg
ctcctagtggcatcagatgctgtttgttgcttgattgagaagggtggcactggcaatata
gattctgaaatgatagaagtaagtggtgctgatatacggatattagatggggaacagatc
atggcttgtgcttcagaagatgatgtagtaatagagatcactggtgagtataaaaatgta
cagaatgcactgtttatggttactgggaaactgaggggtaatcttttgcctagtgaggtg
ctcaatgaaaagaaagcaaggagtccccaaggaagaaaagtggagactgcttctcctaga
ttgcatcaaccggcaggcctgtctcctgattctgatcaagaaactagtttgacaagagca
atgaatcagcttggattctccagcagcttcaacaatgcttctttaccgagactgcagtca
gcacagaagtttcaaagagagcatacaacagcaattaaaaatcaagagaacagcttacaa
gcatttggtgggggttcaggacttgaaaggtctctgcacttccttttgcccaaggaggta
cttaatgaggtaggtgaaagaagctctagtggaggagtgagacagactacaagttctgga
tcccattcatcatcgggcctagctcctggtcccattcaagatacttctttaacacgaggg
atcaatcaacctcaactctccaacaacattgactttccttcacctgcattacatatgcca
cagcagactgcaggaagagggaaaacttttggacggggtgcagaacttgagagttacagc
agaaagagatctcctattgtggtgaacacaatcattgagctcgtagttcctgaagatact
attggctctgtttatggtgaagatggcagcaatctggctcgattaagacagatttcaggt
gcaaaagttgaagtgcgcgagccttcttccggcaaaagtgggaggatagttgtcatatca
ggaacacctgatcaaaccaatgcagcgcaaagcctgcttcaagccttcattctagcagac
cagtaa
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