Ricinus communis (castor bean): 8277529
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Entry
8277529 CDS
T01087
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF complex subunit SWI3B
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
8277529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rcu03021
]
8277529
03036 Chromosome and associated proteins [BR:
rcu03036
]
8277529
Transcription machinery [BR:
rcu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
8277529
Chromosome and associated proteins [BR:
rcu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
8277529
PBAF complex
8277529
GBAF(ncBAF) complex
8277529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
Myb_DNA-bind_7
TraF_2
Motif
Other DBs
NCBI-GeneID:
8277529
NCBI-ProteinID:
XP_025014865
LinkDB
All DBs
Position
6:16129076..16132667
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AA seq
493 aa
AA seq
DB search
MAASTPSFKDPPLPSSTPVPPSLNPPPPPPPPPPPPPPSSSPPSTNNVTPRPPPPSSDAD
VVHIPSYSRWFSWNSIHECEVRFLPDFFDSRSPSKNPRVYKYYRNSIIKCFRQNNPSVKI
TFTEVRKTLVGDVGSIRRVFDFLEAWGLINYFPSALSKPLKWEDKDAKSSASADVKGNSA
DSTPPKRDATKRLCSGCQSVCSIACFVCDKFDLTLCARCYVRGNYRIGVSSTDFRRVEIS
EEIRSEWTEKETLQLLEAVTHFGDDWKKVALHVPGRSERDCVSHFIKLPFGEQFAGYTDL
GELNDKYDQVKDSSDAVCGSESIDSSSSSKKMRLTPLADASNPIMGQAAFLSALAGTEVA
EAAARAAVTALSEPSKSSLGSFSRSTREQGAIDASNGNAEQNGCERTSLDANSLLEKEEL
DAERAISRLVEVQLKEIQDKIIRFEKLDLLMEKEWQQLEQVKNLLFVDQLTLLFHKKSAP
KTEEHVEENVRTE
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggccgcttctacaccttcttttaaagaccctcctttaccctcctccaccccagtccca
ccttctttaaacccaccaccgccacctccacctccacctccaccgccacctccgagttcc
tcaccgccctccaccaacaacgtcactccccgcccaccacccccctcctccgatgccgac
gttgtccatatccctagttactccaggtggttctcttggaacagtattcatgagtgcgag
gttcggtttttacctgatttctttgattcacgttcgccttcgaagaaccctagggtttat
aagtactataggaactcaattatcaagtgttttaggcagaataatccttctgtaaagatt
acctttacggaggttaggaaaacacttgttggtgatgtgggttctattcgtagggttttt
gattttttggaagcttggggtttgattaattattttcctagtgctttgagtaaaccatta
aaatgggaagataaagatgctaagagtagtgctagtgctgatgttaaaggcaattctgct
gattctacacctccgaaaagggatgctactaaaagattgtgtagcggttgccagtctgtt
tgcagcattgcttgctttgtttgcgataagtttgacttgacactttgtgctcggtgctat
gttcgtggcaactatcgcattggtgttagttccacggatttcaggcgggttgagatcagt
gaagaaataaggtcagaatggacagagaaagaaacattgcaacttctggaggcggttaca
cattttggtgatgactggaagaaggttgcacttcatgtgcctggtagaagtgagagggac
tgtgtctctcattttatcaagcttccttttggggaacaatttgctggttatacagacttg
ggggaactgaatgacaagtatgaccaagtgaaggactctagtgatgccgtatgtggatca
gaaagtattgactcctcatcttcgagcaaaaagatgcgtcttacacctcttgcagatgct
agcaaccctataatgggtcaggctgcttttctatcagctctagcgggtactgaagttgca
gaagctgctgctcgagcagctgtgacagctcttagtgaaccaagtaaaagcagtcttgga
tctttttccaggagtacaagagaacaaggtgccattgatgcatctaacgggaatgcagag
caaaatggatgtgaaaggacttccttagatgctaattcactgctcgagaaggaagagcta
gatgcggagagagcgatctccaggctggtagaagtgcagctgaaagagatccaagacaag
attattcgatttgagaagttggatttgctgatggagaaagagtggcagcagttagagcaa
gtgaaaaatctgctctttgttgatcagctcacacttttatttcataaaaaatcagcccca
aaaactgaggaacatgtggaggagaatgtaagaacagagtga
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