Ricinus communis (castor bean): 8277550
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Entry
8277550 CDS
T01087
Name
(RefSeq) DNA topoisomerase 1 alpha
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rcu03032
]
8277550
Enzymes [BR:
rcu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
8277550
DNA replication proteins [BR:
rcu03032
]
Eukaryotic type
DNA Topoisomerases
8277550
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Fn3_PTPRU
Motif
Other DBs
NCBI-GeneID:
8277550
NCBI-ProteinID:
XP_002529020
UniProt:
B9SSQ1
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All DBs
Position
9:7029411..7036094
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AA seq
886 aa
AA seq
DB search
MTMAAPATAKPNIYEYDEDDDDMPLVFKRGNNSTTKQNQSNPEVKKPLLSSQNSNGQSSN
AQKGKSTVPSLKASPVKSPIGSPKASTSSAKASPLRSPVANSKGSSSLDEQLKQASNVVK
DVSSAKPEIGLKSVKHETKSNGDDEDSEDDLPLSARRKGNTNNVSKVVTAPKRVKDEDSD
DDKVPLCSRFPMKSTAGTSGNKLNNISEKKPLPSKVQQNGSTSKDKQQKAPLIPTKRPLD
KANSSEQSSIKKPKLSAGSTITKVKQATVKAEEDDPDDIPIAQRKKSLGSSESKLSSAKQ
KAIKVVSSSFKKPIKKNKKQMKNTKYSKSTKVQPSSTDGQKKWTTLIHNGVIFPPPYKPH
GIKILYKGRPVDLAPEQEEVATMFAVMKDTDYMQKPKFLENFWNDWRKLLGRNHVIQKLE
DCDFTPIYEWHEREKEKKKQMSTEEKKAQKEEKLRQEEKYMWAIVDGVKEKVGNFRVEPP
ALFRGRGEHPKMGKLKKRIQPSDITINIGKDAPIPECPIPGESWKEVKHDNTVTWLAFWN
DPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIHNIRAAYQKDLRSKDITKKQIA
VATYLIDKLALRAGNEKDDDEADTVGCCTLKVANVECIPGSFNLKFDFLGKDSIRYENTV
EVKPEVYEAIGTFQKGKKQTDDLFDKLDTTKLNAHLKELMPGLTAKVFRTYNASITLDEK
LYEETEDGDVAEKVVIYQRANKEVAIICNHQRTISKSHGAQMSKLIEKIEELKATLKELK
TDLDRAKKGKPPLKDADGKQKRNLSPENIEKKIASTNQRIEKMELNMKTKEDLKTVALGT
SKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFTWAMDVDPQFRF
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgacaatggcggcgccggcaactgcaaaaccaaacatctatgaatatgatgaggatgac
gatgacatgcccttagtttttaaaaggggtaataactcaacaactaagcaaaatcagtcg
aatccggaagtgaagaaaccattattgtcttctcagaactccaatggccaaagctccaat
gctcagaagggtaaaagcactgttccatctttgaaggcatcaccggtaaagtctccaata
gggagccctaaagcatcaacgtcatctgccaaggcatctccattgaggtcaccagtggca
aattcaaaaggatcaagttctttagatgaacagttaaaacaggcatctaatgttgtgaag
gatgtcagttctgctaaacctgaaattggactcaaatctgttaaacacgagactaaatca
aatggtgatgatgaggattctgaggatgacttaccattgagtgctagaagaaagggaaat
acaaacaatgtcagcaaggtggttactgcacctaaacgtgtcaaagatgaagattcagat
gatgataaagtcccattgtgctcaaggttcccaatgaagtcaactgcagggacatctggt
aataagcttaacaacattagtgaaaagaaacctttgccttcaaaagttcaacagaatggt
tccacttcaaaggacaagcaacagaaagctccactgattccaactaagcgacctctcgat
aaggctaattcttccgagcaatcttctattaaaaagcctaagctttctgctggatccaca
ataacaaaagtcaagcaagcaacagttaaggcagaagaagatgatcctgatgacatccca
attgcccagagaaagaagagcttaggctcctctgagagcaaattgtcatctgctaagcag
aaagcaataaaagttgtttcttcatcattcaaaaagccgattaagaagaacaagaaacaa
atgaaaaatacaaaatactctaagtcaacaaaagtacagcctagctccaccgatgggcag
aaaaaatggactaccttgattcacaatggtgtgatttttccacctccttacaagcctcat
ggcattaagattctctacaagggccggccagttgatttggcacctgaacaagaggaggtt
gcaacaatgtttgcagtgatgaaagatacagactacatgcaaaaaccaaagtttctagag
aacttctggaatgattggcgcaaactattggggaggaaccatgtaatacagaagttggag
gattgtgatttcactccaatatatgaatggcatgaacgggagaaggagaagaagaaacaa
atgagtacagaagagaagaaggcccagaaagaagaaaaattgaggcaagaggagaagtac
atgtgggctattgttgatggtgtgaaggaaaaggtcggaaatttcagagttgaaccacct
gcgctgtttcgaggacggggagagcatcctaagatggggaagttgaaaaagcgcatccag
ccaagcgacattaccataaatattggaaaagatgccccaattcctgaatgtcctattcct
ggtgaaagctggaaggaagtaaaacatgataatactgttacatggttggctttctggaat
gatccaatcaatccaaaagaattcaagtatgttttcttggcagccagtagttccttgaag
gggcaaagtgacaaggaaaaatacgaaaaagcaaggaagctgaaggactacatacataat
atcagagcagcttatcaaaaggatttgaggagtaaagatattacgaagaagcaaatagca
gttgctacctatcttattgataagctagctcttagggcgggtaatgagaaggatgatgat
gaagctgatactgttggttgttgtacactaaaggtagcaaatgtagagtgtattcctgga
agctttaatttaaagtttgacttccttggtaaagattcaattcgatatgaaaacacagtt
gaggttaagcctgaggtgtatgaggcaattggaacctttcaaaagggtaaaaagcaaact
gatgatctttttgacaagctggatacaactaaactgaatgctcacctaaaggaactcatg
cctggccttacagcaaaagtttttcgtacatataatgcatcaatcacattggatgaaaag
ttatatgaggaaactgaggatggtgatgttgcagaaaaagttgtgatttaccaacgggca
aacaaggaggttgcaatcatttgtaatcatcagcgtacaatctcaaaatcccatggtgca
caaatgtcaaagttgatagagaaaattgaggaacttaaggccactctgaaagagctgaaa
actgatttagacagggccaagaaggggaagcccccgctgaaggatgcagatggaaagcaa
aagaggaacttgagtcctgaaaatatagagaaaaagattgcatcaaccaatcaaagaatt
gagaaaatggaactaaatatgaagaccaaagaggatctgaaaactgtggcattaggcacg
tccaaaatcaattaccttgatcctagaatcactgttgcatggtgcaagcgacatgaagtt
cccattgaaaagatatttaacaaatctctactagctaagtttacgtgggcaatggatgtg
gatcctcaattcagattctaa
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