Ricinus communis (castor bean): 8277697
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Entry
8277697 CDS
T01087
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
8277697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rcu03009
]
8277697
Ribosome biogenesis [BR:
rcu03009
]
Eukaryotic type
Pre-60S particles
GTPases
8277697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFL1
EF-G_D2
EFG_III
GTP_EFTU_D2
SRPRB
EFG_IV
RNase_3_N
Beta-prop_Nup120_160
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
8277697
NCBI-ProteinID:
XP_002515715
UniProt:
B9RPP6
LinkDB
All DBs
Position
7:19187809..19191276
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AA seq
1028 aa
AA seq
DB search
MGDFDDARKVRNICILAHVDHGKTTLADHLIAATGGGLLHPKLAGKLRFMDYLDEEQRRA
ITMKSSSIALHYKDYSINLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVL
RQSWLEKLSPCLVLNKIDRLICELKLSPMEAYNRLLRIVHEVNGIMSAYKSERYLSDVDS
ILSAPSGELGDENLELIEDDEEDTFQPQKGNVAFVCALDGWGFSISEFAEFYASKLGASS
AALQKALWGPRYFNPKTKMIVGKKGLEGGGKARPMFVQFVLEPLWQVYHSALEPDGNKGL
LEKVIKSFNLSVPPRELQNKDPKLVLQAVMSRWLPLSDSVLSMVVKCMPDPIAAQSFRIS
RLLPKRDVLHDVADPSVITETDLVRKSIEICDSSPEAASVAFVSKMFAVPTKMLPQRGPN
GEILNNYSDENGNGESDECFLAFARIFSGVLYSGQRVFVLSALYDPLRGDSMQKHVQEAE
LHSLYLMMGQGLKPVTSAKAGNVVAIRGLGQHILKSATLSSTRNCWPFSSMTFQVAPTLR
VAVEPSDPADITALMKGLRLLNRADPFVEVTVSSRGEHVLAAAGEVHLERCVKDLRERFA
KVSLEVSPPLVSYKETIENNASNAFDNLKSLSKSSDYVEKITPNGRCVVRAQVMKLPPAL
TKVLDESASILGDIIGGNLGQSNRGVETQGSSVLQDENSVEALKKRITDAVESEVLSWSE
NDKDRPEKYKLKWQKLLKKIWALGPRQVGPNILFTPDLKSKINDSSVLIRGSPHVSEKLG
LVDNYRDCNTPANASSEVTKPLQMEAESLQNSLVSGFQLATAAGPLCDEPMWGVAFVVEA
YVSPLAEQADESESNQQSEQYGMFTGQVMAAVKDACRAAVLQNKPRLVEAMYFCELNTPT
EFLGPMYAVLNRRRARVLKEEMQEGSPLFTVHAYVPVSESFGFPDELRRWTSGAASALLV
LSHWEALPEDPFFVPKTEEEIEEFGDGSSVLPNTSRKLIDAVRRRKGLPVEEKVVQHATK
QRTLARKV
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgggtgattttgatgatgcccgaaaagtgagaaacatatgcatattagcacatgttgat
catgggaagactacgcttgctgatcaccttattgccgccactggtggtggtctgcttcac
cctaaattagcggggaagcttaggtttatggattatcttgatgaggaacaaaggcgtgct
ataactatgaagagctcttcaattgctcttcattataaggactactcgattaaccttata
gactcccctggtcatatggatttttgcagtgaggtctctaccgctgcgagattgagtgat
ggggctttagttttggttgatgctgttgagggagttcatattcagacacatgctgttttg
cgtcagtcttggcttgagaagctcagtccttgtttggtgcttaataagattgataggttg
atctgtgagttgaagttgagtcctatggaagcatataaccgtcttttgaggattgttcat
gaggttaatggaattatgagtgcatacaagtctgagagatatttgtcagatgttgattct
atactttccgcgccatctggtgagttgggtgatgaaaatcttgagttaatagaagatgac
gaggaggatacttttcaaccgcagaaggggaatgtggcatttgtttgtgcattagatggg
tggggttttagtattagtgagtttgctgaattttacgcgtcaaagcttggtgcaagttca
gctgcattgcagaaggctttgtggggtcctaggtatttcaatcctaagactaagatgatt
gtagggaagaagggactggaaggaggaggcaaggctcggcctatgtttgtgcaatttgtg
cttgaaccattgtggcaggtttaccattcagccttagagcctgatggaaataaaggatta
cttgagaaagttattaagtcatttaatttgagtgtgccacctcgtgaacttcaaaataag
gatccaaagcttgtgcttcaagctgtcatgagccgctggcttcctttgtcagattctgtt
ttatccatggttgtgaaatgtatgccagatcctattgctgcccagtcttttcgaatttca
cgtttgcttccaaagagagatgttttgcatgatgtggctgacccgagtgtcattactgag
acagatcttgtgaggaagtcgattgagatttgtgattctagccctgaagcagcttctgtt
gcttttgtatccaagatgtttgctgtaccaacaaaaatgctacctcaaaggggtccaaat
ggggagattttgaataactacagtgatgaaaatggaaatggtgaatcggatgagtgcttc
cttgcatttgcaaggatttttagtggggttctttattcaggtcaaagagtttttgttctt
tcagcattatatgaccctttgaggggagactcaatgcagaagcatgtgcaggaggctgag
ttgcattccttgtatctcatgatgggtcaaggcttgaaaccagtgacctctgcaaaagca
gggaacgttgtggcaattcgaggcctcggccaacatattttaaaaagtgcaactctttca
tccacgagaaactgttggcctttctccagcatgacattccaggttgctccaactctaaga
gttgcagttgagccatctgatccagcagatattactgctctaatgaaaggtttgaggctt
ctgaacagggcagatccatttgtagaggtaactgtttcttctagaggggagcatgtgctt
gctgctgctggtgaagttcacttagaaagatgcgtcaaagatttgagggaaagatttgca
aaggtgagcctggaagtctctccacctctcgtatcctataaggagaccattgagaataat
gcatccaatgcttttgataatctgaagtcactgagtaaaagctctgattatgtggagaaa
ataacaccaaatggaagatgtgttgttcgcgcgcaagtcatgaaacttccacctgctcta
accaaggtgcttgatgaaagtgccagtatacttggggacattattggtgggaacctgggg
cagtcaaatagaggtgtggaaacacaaggatcaagcgttttgcaagatgagaattcagtt
gaagcacttaagaaacgcataactgatgctgtggagagtgaagttttgtcttggagtgaa
aatgacaaggatcggcctgagaaatataaactcaagtggcaaaaattgctcaagaagatt
tgggcacttggtccaagacaggttggcccaaacatcctcttcactccagatttgaaaagc
aagatcaacgattcctctgttcttataaggggttctcctcatgtatctgaaaaattgggc
ttagtggataattatagggattgtaatacacctgccaatgcttcgtctgaagtaactaaa
ccattacagatggaagcagagagtctgcagaacagtttagtgtctggatttcagcttgca
acagcagctggacctttatgtgatgaaccaatgtggggagtggcttttgtggttgaggct
tatgtatctcccttggctgagcaggctgacgagtcagaatctaatcaacaatctgagcag
tatggtatgttcacagggcaggttatggcagctgtcaaggatgcatgtagagcagctgta
cttcagaacaaaccccggcttgttgaggcaatgtatttttgtgaattgaacacgccaact
gaatttttgggccctatgtatgcagtgcttaatcgtagacgggctcgggtcttgaaggag
gaaatgcaggaaggatctccacttttcacagttcacgcatatgtcccagtttctgagagc
tttggttttcctgatgagctcagaagatggacttcaggtgctgcaagtgctcttcttgtt
cttagccattgggaagcactccctgaggatcctttcttcgtaccaaaaacagaagaagaa
attgaagagtttggagatggttccagtgttctgccgaatacatcgagaaaactcattgat
gctgtaaggcggcggaagggcctccctgtggaggaaaaagtagtccagcatgctaccaaa
cagaggacattggcgcgaaaagtgtag
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