Ricinus communis (castor bean): 8277822
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Entry
8277822 CDS
T01087
Name
(RefSeq) ATP-dependent DNA helicase PIF1 isoform X1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rcu03032
]
8277822
03029 Mitochondrial biogenesis [BR:
rcu03029
]
8277822
Enzymes [BR:
rcu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
8277822
DNA replication proteins [BR:
rcu03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
8277822
Mitochondrial biogenesis [BR:
rcu03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
8277822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
AAA_19
AAA_30
Pif1_2B_dom
AAA_22
DEAD
AAA_16
SLFN-g3_helicase
AAA_5
Helicase_RecD
NACHT
NPHP3_N
ATP-synt_ab
ATPase
cobW
nSTAND3
NTPase_1
AAA_7
ABC_tran
ResIII
T2SSE
UvrD-helicase
RQC
UvrD_C_2
ATPase_2
PhoH
AAA
AAA_25
Motif
Other DBs
NCBI-GeneID:
8277822
NCBI-ProteinID:
XP_015575430
UniProt:
B9S328
LinkDB
All DBs
Position
5:complement(14714319..14717548)
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AA seq
512 aa
AA seq
DB search
MMTRAIAVFRTFSAKTGSKIPKTAQSGYKKKTGNKPRIKWTEEHKGILDYVIRGKSVFIT
GSAGTGKTVLLGHIISILKRAHGSSGVVVTASTGSAACAIKGQTLHSFAGFGIGDGDPKA
LLERVVRNSRACKRWNQVKVLVVDEISMIGGNTFDTLEFIARQIRGSNNVWGGIQLIVSG
DFFQLPLVLKKSNPSGKEFAFEADCWNRSFHAQVEITKVFRQTDPQLINLLQGIRKGVID
TEDLKLLEQCCSNNEPDPSAVRLYPRIEDVNKVNEKRLKSLGEKIVAYKAVDGGTRKELL
KQGMAQDQLEICKGARVMLIKNLHVWSKLCNGATGTVIGFVEPYDDVIDLFPDNLLPVVK
FDSGKVTVIKPQKWECYEGDDFVAWRSQLPLRLAYALSIHKCQGMTIDCLYTDLSRSFIY
GMVYAVLSRGRTMKGIQLSGFEPSMIKANPKVLHFYDQLSSKQCTEAGDVDDVTYKKKVS
NSKVLGHSDKTSIEVRKCHFSLSKFLEKLYSS
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgatgactcgtgctatagctgtatttaggacttttagcgctaaaactggcagtaaaatc
ccaaaaactgctcaatcaggttacaagaagaagactggcaataaacctagaattaaatgg
actgaggaacataaaggcatattagattatgttattcgcggtaaatctgtgttcatcact
ggctctgctggcactggaaagacagttttgcttggacatatcattagtattctgaaaagg
gctcatggttcttctggtgttgttgtcactgcgtccactggaagtgctgcatgtgctatt
aaagggcaaacacttcactcttttgctggctttggaatcggcgacggtgatcctaaagct
ctgctcgagagggttgtaaggaacagccgtgcttgtaaaagatggaatcaggtaaaggta
ttagttgtggatgaaattagtatgattggtgggaatacgtttgatactcttgaattcatt
gctagacaaatacggggatcaaacaatgtatggggtggaatacagcttattgtcagtggg
gacttctttcagttaccactagttcttaagaaaagcaacccatcaggaaaagagtttgca
tttgaagctgattgttggaatagaagctttcatgcacaagttgaaataacaaaggttttt
aggcaaacagatcctcagcttatcaatttgcttcaaggtataaggaaaggagtcattgat
actgaggacctaaagcttttagaacagtgttgctccaacaatgagccagatccctcagca
gtgaggctctatccaaggattgaagatgtgaataaagtgaatgagaagaggctgaaaagc
ttgggtgagaaaatagttgcttataaagctgttgatggtggcactaggaaggagctactc
aaacaagggatggcgcaggaccagcttgagatttgtaaaggagcaagggtgatgctgata
aagaatttgcatgtctggagcaagctttgtaatggtgccacaggtacagtcataggattt
gttgagccatatgatgatgttatagacctgttcccagataatctgttgcctgtcgtcaaa
tttgattcaggtaaggtaacagtaatcaagccacaaaaatgggaatgttatgaaggggat
gattttgttgcttggagatctcaactacctcttaggttagcttatgctctgagtatacat
aaatgccagggcatgaccattgactgcctttacacagatctctccagatcttttatctat
ggaatggtatatgctgtactttcgcgtgggaggaccatgaaaggcattcaattatctggc
ttcgagccatcaatgattaaagcaaacccaaaggttttacatttctatgaccagttatct
agtaagcagtgcacagaggctggagatgtggatgatgttacctacaaaaagaaagtcagc
aactctaaggttcttggtcattcagataaaacaagcattgaagtcaggaagtgccatttc
tctctttcaaaattcttggagaaattatattctagttag
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