Ricinus communis (castor bean): 8277870
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Entry
8277870 CDS
T01087
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00040
Pentose and glucuronate interconversions
rcu01100
Metabolic pathways
Module
rcu_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
8277870
Enzymes [BR:
rcu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
8277870
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
pAdhesive_6
Motif
Other DBs
NCBI-GeneID:
8277870
NCBI-ProteinID:
XP_002526193
UniProt:
B9SJM4
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Position
5:6006392..6008215
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AA seq
392 aa
AA seq
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MKSKLNILTIFVLLSISLKIRAEKVFDVKNFGATPSQKNDISKALLDAWKAACSTPGASR
ILIPHAKYALRDVLLEGPCKGSMVLQIKGTLMAPSDPSEHHSQGWITFQHVDHLTISGGN
LDGRGKIAWGKNTCRTNVNCKNLPMNLRFDFVTNTIIEDLTSRDSKNFHMNLIGCQNFTL
QRIKIIAPGDSANTDGIHIGRSNGVNIIDSKIGTGDDCISIGDGSRNIKITGVRCGPGHG
ISIGSLGKYKNEEPVSGVYVKKCDLINTTNGIRIKSWPGLYSGTATDLHFEDISMNNVSN
AILIDQMYCPWNHCNSKASSNVKISKVTFSNIKGTSSIPTIVKLLCSKGLPCEGVELNNI
NVVYKGPEGPAKSECTNVKPKIGIRTDALHGC
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctaaattgaatattttaacaatctttgtattgttgtcaatttctttgaaaatt
agagcagaaaaagttttcgatgtgaaaaattttggtgctacacctagccaaaagaatgat
attagtaaggctttattagatgcttggaaagctgcttgttccacaccaggtgcaagtaga
attttgattccacatgctaaatatgcattacgggatgtacttttggaaggcccttgtaag
ggttcaatggtacttcaaattaaaggaaccttaatggctccatcagaccctagtgagcac
catagccagggttggattactttccaacatgtcgatcatttaactatatctggaggtaat
ttggatggtcgaggaaaaattgcatgggggaaaaatacttgtcgtacgaatgtaaattgc
aagaatctcccaatgaatttaaggtttgattttgtcactaataccatcattgaagattta
acttcccgggatagtaagaattttcacatgaatctcatcggatgccaaaattttacactc
caacgtattaagattatagcgcctggtgatagtgctaatacagacggaattcacattgga
cgttctaatggagtaaacattattgattcaaagattggcactggtgatgattgcatctct
attggtgatggcagtcggaatatcaaaatcacaggagtaagatgtggaccaggtcacggt
attagcattggaagcttaggaaaatacaaaaatgaagaacctgttagtggagtttatgtt
aagaaatgcgacctcataaatactactaatggcataagaattaaatcttggccaggacta
tacagtggcactgcaactgatttgcactttgaagatatttccatgaataacgtgagcaac
gctatcctcatagatcaaatgtactgtccttggaaccactgcaattccaaggcttcatca
aatgttaagatcagtaaggttactttctctaatataaagggcacttcttcaattcctacc
atcgttaaacttttatgcagcaaaggcttaccatgcgagggcgtggaactcaataatatt
aacgtcgtatataagggccctgaaggtcctgcaaaatctgaatgtacaaatgtcaagcct
aaaatcgggatacgaacagatgcgcttcatggatgctaa
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