Ricinus communis (castor bean): 8278038
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Entry
8278038 CDS
T01087
Name
(RefSeq) uncharacterized protein LOC8278038
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
8278038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rcu03036
]
8278038
Chromosome and associated proteins [BR:
rcu03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
8278038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7441
Motif
Other DBs
NCBI-GeneID:
8278038
NCBI-ProteinID:
XP_002532814
UniProt:
B9T3J5
LinkDB
All DBs
Position
8:complement(17305079..17310853)
Genome browser
AA seq
1410 aa
AA seq
DB search
MAIEKNSFKESRFDPEFSPNSRESMSSDDDDEVQRRGAVSAAESDDVDIGEEDEDDDDDD
EFDDADSGAGSDDFDLLELGETGAEFCRIGNLTCSVPFELYDLSGLEDILSVDVWNDVLT
EDERFSLTKYLPDLDQYTFMRTLKELFEGQNFHFGSPIKKLFEMLKGGLCEPRVALYREG
LNFFQKRQHYHLLRKHQNNMVTNLCQIRDAWFNCRGYSIEEKLRVLNIMKSEKSLMYEKI
EEDLESDSSEKEELDDGLWSKKVKVLKDRKSALKLGRTSAYEVGANLEFSSRMPSLNLEA
AKYGKPNPKGILKLAGSKTLSSKEMGGRLPSVYQGLETNSRPYGFPVPNSRQKAMAYDPG
AALRLRDQMRTDDDNDDNAEETIYGMGLGVQRDRSMTYSGLMEKSGVSRSGKKHDMRIQE
LGTDSLVGFPFSSKNDLHAYGRNRNVNQLSEVKRSTAKPPNFRTSHEFGKKAKYPGNIHQ
FAVGDQMKSLKGRTPQLTLKSNQVDLSEHGDPIWHGKNQGLAFPVDSSLISDDWTVRSKK
WKAGRESPDLNFKTCASSSPQASDRILLSELRAKPVREKIRANLMQNGGPDKGAKKSNRL
YAKNEDTESDSSEHFEDDDEGVNPLMRSKTTYLSDMMEGSRSLLLKSGLDAKKGRFAKKD
VTTVAFDGITDFSKKVAGFNELGDIPEYSLKAKQKGKMRDSSPLHSSGIRVVENSFPLVL
GKAKDDNDRNRSRKLGKNGQLRESGESLYMTSVKAYPSDGKQKREVSHDYAIDEEDDSLE
TRLLADENALSRFGKKGQDSEVYVHNRRDRSDAAFVGLSSMAKKRKANQDLTDVDGRDGG
GNLPQQVDDSISLKRKGKRKVEADTGTLDMETSEAPVLEITTVDMDVEIKPQKKPYTPIT
PTVHTGFSFSIIHLLSAIRLAMISPLPEDSLEVGKSSEQQNGNHEGDTNGIVSHESADAN
KSEHAVQVNVPSLTVQEIVNRVRSNPGDPCILETQEPLQDLVRGVLKIFSSKTAPLGAKG
WKALVVYEKSTKSWSWIGPVSHTSTDHETMEEVTSPEYWGLPHKMLVKLVDSFANWLKSG
QETLQQIGSLPAPPVSLMQCNLDEKERFRDLRAQKSLNTISPSSEEVRDYFRKEEVLRYS
IPDRAFSYTAADGKKSIVAPLRRCGGKPTSKARDHFMLKRDRPPHVTILCLVRDAAARLP
GSIGTRADVCTLIRDSQYIVEDVSDAQVNQVVSGALDRLHYERDPCVQFDGERKLWVYLH
REREEEDFEDDGTSSTKKWKRQKKDPADQPNQGVVTVAFHANDQSGFANDQPGLELGSDL
NVEPSVIDDDKRIDPVGNDVKQSMEDNAETSHVSDLGDMHQGHPMVWDALSINPIRESRL
LCQENSTNEDFDDETFSRERPVGLLSASLS
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atggccattgagaagaacagtttcaaagagtctaggtttgatccagagttttctcccaat
agtagggagagtatgtctagtgatgatgatgatgaggttcagcgtcggggagccgtctcg
gctgctgaatctgatgatgttgatattggtgaggaggatgaggatgatgatgatgatgat
gaatttgatgacgcggattcaggagcgggatctgatgattttgatttgttagaattaggt
gaaactggggctgagttttgtcgaattgggaatttaacttgtagtgttccttttgaatta
tatgatctttcgggtttggaggatatattgtctgttgatgtttggaatgatgttttaact
gaagatgaaagatttagtctcactaagtatttgccggatttggatcagtacacattcatg
cgaacccttaaagagctatttgagggtcagaattttcattttggcagtccaattaagaaa
ttgtttgagatgttaaaaggtggattatgtgagccaagagttgctctttatagggagggt
ttgaatttctttcagaagcggcagcattaccatctcttgaggaagcatcagaataatatg
gttactaatttatgtcagataagggatgcttggtttaattgtaggggatatagtattgaa
gagaagcttagagtcttgaatataatgaagagtgaaaagagcttgatgtatgagaagatt
gaggaagatctggagagtgattcatcggagaaagaggaattagatgatgggttatggagc
aaaaaggttaaggtcctcaaggataggaaaagtgcactgaaattgggccgtacttctgct
tatgaggttggtgcaaatttggaattttcttcacgaatgccttctctaaatttggaagct
gcaaagtatgggaaaccgaatccgaagggtatactgaagttggctgggtcaaaaacattg
tcatcaaaggagatgggtggtcgattaccttctgtttatcaaggtttagagacaaattct
aggccctatggttttccagtgccaaattctcgtcagaaggcaatggcatatgacccaggt
gcagcactcaggctaagggatcagatgagaactgatgacgacaacgatgataatgctgaa
gagacaatatatggtatgggattgggtgtccaacgagaccgaagtatgacatatagtggt
ctgatggaaaaatctggggtttcgagatcaggaaagaagcatgacatgagaattcaggaa
ctaggcactgacagtttggtgggctttcctttctcttcaaagaatgatttacatgcttat
gggaggaacaggaatgtaaatcagctgtcagaagtgaaacggtccacagctaagccacct
aattttcgaacttcccatgagtttggcaagaaggcaaagtatcctggaaacattcatcaa
tttgctgttggagatcagatgaagtcactgaaaggccgaacaccgcagctaactctgaag
agtaatcaggttgacttgtcagaacatggtgatccaatttggcatggcaagaaccaagga
cttgctttccctgtggattcctctctgatttctgatgattggactgtgcgaagcaagaag
tggaaggcagggagggagtccccagatctcaattttaaaacttgtgcatcctcctctcct
caggcgagtgatagaattctgctgtctgaattgagagcaaaaccggtacgggagaagatc
agagcaaatctaatgcagaatggaggaccagataaaggagcaaagaaatcgaacaggtta
tatgcgaaaaatgaagatacagaatcagattcgtctgaacattttgaagatgatgatgag
ggtgtcaatcctttgatgagaagcaagacaacttatctcagtgatatgatggagggctct
cgttcattgttgttgaagtctggccttgatgctaaaaagggcagatttgccaagaaagat
gtgactacagtggcttttgatggaataacagatttctccaagaaggtggctggctttaat
gagcttggagacataccagaatactcattaaaagcaaaacagaagggaaagatgcgtgat
agcagtccattgcatagctctggcattagagttgtggagaacagctttccccttgttttg
ggtaaagctaaagatgataatgacaggaacagaagtcgcaaattaggcaagaacgggcag
ttgcgtgaatctggggaaagtttatacatgacctcagtgaaggcctatccttctgatgga
aagcagaaaagagaagtcagccatgattatgctattgatgaggaggatgattcacttgaa
acacgtctattagcagatgaaaatgcactgagtagatttgggaagaaaggacaggacagt
gaagtatacgtgcataatcgacgtgacagatctgatgctgcatttgtagggctcagctca
atggcaaagaaacggaaagcaaatcaggacttgactgatgttgatggaagagatggaggt
ggtaatcttccgcagcaagttgatgactctatttcattgaagagaaagggaaaaaggaaa
gtggaggctgacactggcactttagatatggaaacttctgaagcgcccgttttagaaatc
acaacagtagacatggatgtggaaatcaaaccacaaaaaaagccatatacaccaattacg
cctactgttcatactggcttctcattttccattatacatcttctttcagcgattcgcctg
gcgatgatcagtcctcttccagaagattccttagaagttgggaaatctagtgaacagcag
aatggaaatcacgaaggtgacacaaatgggattgtttctcatgagagtgctgatgccaat
aaatcagagcatgcagtgcaggtgaatgtaccttctctcactgtacaagagattgttaac
cgtgtgagatcaaaccctggggatccttgtattcttgagacacaagagccactccaggat
ctggttagaggagtgctcaagatattttcatcgaaaacggcacctttaggagcaaagggt
tggaaggccctggtggtgtatgaaaaatctacaaagagttggtcttggattggtcctgtt
tctcatacttcaacagatcatgagactatggaggaggtaacatctcctgagtattggggc
cttcctcataaaatgcttgtcaagctagttgattcatttgctaattggctgaaaagtggt
caagagactcttcaacaaattggaagtcttccagcaccacctgtgtcattgatgcaatgc
aacctggatgagaaagaaaggttcagggacttgagagctcagaagagtctcaacactatt
agcccaagttctgaagaagtaagggattatttccgcaaggaagaagttctgaggtattcc
attccagacagagccttctcatacacagctgctgatggcaaaaagtcaattgttgctccc
ttgagaaggtgtggtggtaagccaacatcaaaagcccgagaccatttcatgctgaagcgt
gatcggccacctcatgttacaattctttgtcttgtgagagatgcagctgccaggttacct
ggaagtatcggcactagagcagatgtttgtaccttaataagggactctcagtatattgtc
gaagatgtatctgatgctcaagtgaatcaagttgttagtggagccttggaccgtttacat
tatgaacgtgatccttgtgtacaatttgatggggaaaggaaattgtgggtatacttgcat
agggagagagaagaagaagattttgaagatgatggcacgtcatctaccaagaaatggaag
agacagaaaaaggatccagcagaccaacccaaccaaggagttgtaactgtggcttttcat
gcgaatgatcagtctggatttgcgaatgatcagcctggacttgagttgggctctgacctc
aatgtggagccatcagtcattgatgatgataaaagaatagatcctgtgggtaatgatgtg
aaacaaagcatggaagacaatgctgagaccagtcatgtgtcagacctaggagacatgcat
caaggtcatccaatggtttgggatgcccttagtataaatccaatacgagagagtagattg
ttgtgtcaagaaaattccactaatgaagattttgatgatgaaacgttctcgagagagaga
ccagttggactattaagtgcaagcttatcatga
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