Ricinus communis (castor bean): 8278050
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Entry
8278050 CDS
T01087
Name
(RefSeq) translation initiation factor IF-2, chloroplastic
KO
K02519
translation initiation factor IF-2
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
rcu03012
]
8278050
03029 Mitochondrial biogenesis [BR:
rcu03029
]
8278050
Translation factors [BR:
rcu03012
]
Eukaryotic type
Initiation factors
MTIFs
8278050
Prokaryotic type
8278050
Mitochondrial biogenesis [BR:
rcu03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
8278050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
EF-G_D2
MMR_HSR1
GTP_EFTU_D2
IF2_N
Ras
Roc
RsgA_GTPase
GTP_EFTU_D4
Arf
Motif
Other DBs
NCBI-GeneID:
8278050
NCBI-ProteinID:
XP_002532827
UniProt:
B9T3K8
LinkDB
All DBs
Position
9:25278427..25288038
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AA seq
1033 aa
AA seq
DB search
MGSMVVLVGSMPSLASLISLGSLSVAAATSSSSDSYYSSSYSLVRRVSLSKRGLKSAKRW
HCVCKCSVTTTDFIADQGNAVSIDSNNSFRASSNGGDADSEILLKPAPRPVLKPSLGSKG
DSLLGMSSTQLNSGDSDNDDEQERNKVIESLGEVLEKAEKLETSKPSGPGNPSSSGKDNG
NVNKITPPNIGTNSRIAKSESSGATRKTKTLKSVWRKGDTVSSVQKVVKEAPKVINKLVK
EDTITGEGTKLESQSSFPLRPVQPPLRPQPKLQAKPSVAPPPVMKKPVILKDVGAAPRPP
VSGEADSKNNGRQPILVDKFARKKPVVDPLIAQAVLAPTKPGKGPAPGKFKDRKKSISPG
GPRRRLVNNDELEIPDEETSELNVSIPGTARKGRKWSKASRKAARLQAAKDAAPVKVEIL
EVGENGMLIEELAYNLTISEGEILGYLYSKGIKPDGVQTLDKDMVKMICKEHDVEVIDAD
PVGFEEMARKREILDEDDLDKLEDRPPVLTIMGHVDHGKTTLLDYIRKSKVTASEAGGIT
QGIGAYKVLTPVDGKMQPCVFLDTPGHEAFGAMRARGARVTDIAIIVVAADDGIRPQTNE
AIAHAKAAGVPIVVAINKIDKDGANPERVMQDLSSIGLMPEDWGGDIPMVQISALKGDNI
DDLLETVMLVAELQELKANPHRNAKGTVIEAGLDKSKGPIATFIIQNGTLKRGDVVVCGE
AFGKVRALFDDGGKRVDEAGPSIPVQVIGLSNVPKAGDEFEAVASLDIAREKAEACAELL
RNERITAKAGDGKITLSSLASAVSSGRLSGIDLHQLNIILKVDVQGSVEAVRQALQVLPQ
DNVTLKFLLQATGDVSSSDVDLAIASEAIILGFNVKAPGSVKSNAENKGVEIRLYRVIYD
LIDDVRNAMEGLLEPVEEQETIGSAVVRAVFSSGSGRVAGCMVTDGKVVKGCGVKVIRKR
KTIHVGVLDSLRRVKELVKEVSAGLECGIAMEDYDDWEEGDTIEAFNTVEKKRTLEEASA
SMAAALEHAGINV
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgggttcaatggtagttcttgttgggagcatgccgtctttggcttccttgattagctta
ggaagtttaagtgtggcagcagcgacttctagttcttcagactcatattattcatcctca
tattcacttgttcgaagagtttctttatcgaaaaggggtcttaagagtgccaaaagatgg
cattgcgtttgtaaatgctctgttactaccacagattttattgctgatcaaggcaatgct
gtatccattgattctaataattcatttagagcaagcagtaatggtggagatgctgacagt
gaaatcttgcttaagcctgctcctaggcctgtcttaaaaccttcattagggtctaaaggt
gattcccttttaggtatgagctctactcagttgaattctggagattctgataatgatgat
gaacaagagaggaataaagtaattgagtcgcttggtgaggtgttggagaaggctgaaaag
cttgaaacttctaaaccaagtggaccgggtaatcctagcagtagtgggaaagacaatgga
aatgtaaataaaataacaccacctaacattggtactaattcacgaattgctaaatctgag
agttcaggagccactcgtaaaactaaaactttgaagagcgtgtggcgaaaaggggatact
gtgtcctccgtgcaaaaggttgtaaaggaagctcctaaagttattaataagcttgtgaaa
gaagatactataacaggggaaggtacaaagctagaatctcaatctagttttcctttaaga
cctgtgcagccacccttgagacctcaaccaaagttacaggcaaagccatctgtagctcct
cctcctgtgatgaaaaagcctgttatcttgaaggatgtgggagcagccccaagaccacca
gttagtggtgaagctgattcgaaaaataatggacggcagcctattttagttgataaattt
gcccgcaaaaaaccagttgtagatcctctaattgctcaggcagttttagcccccacaaaa
cctggaaagggcccagcccctggaaaattcaaggaccgaaagaagagtatttcacctgga
ggaccaaggagacgacttgttaataatgatgaacttgagattcctgatgaggagacatca
gaactgaatgtctctattccaggtacagctaggaaagggaggaagtggagtaaagctagc
cggaaggctgccagactccaggctgccaaagatgcagctcctgtcaaagtagaaatttta
gaggttggggaaaatggtatgttaattgaggagttagcctacaacttaaccatcagtgaa
ggtgaaattcttgggtatttgtactcaaaggggattaaacctgatggagtgcagactttg
gataaggacatggtaaagatgatatgcaaggaacatgatgtggaagttatagatgctgat
ccagttggatttgaagaaatggcaaggaaaagagaaattcttgatgaagatgatcttgac
aaactagaggacaggcctccagttctaactataatggggcatgtggatcatggcaagaca
actctactggattacattcgtaaaagcaaggtgactgcctcagaagctggtggaattaca
caaggaattggagcatataaagtcctcacacctgtggatggaaaaatgcaaccttgtgtt
tttcttgatactcctggacatgaggcatttggtgcaatgagagctcgtggggcaagggtg
acagatattgctattattgtggtggcagctgatgatgggatccgtcctcaaacaaatgag
gccatagctcatgcaaaagcagctggagttccaattgttgttgctataaacaagatagat
aaagatggggctaatccagaaagagtcatgcaagatctttcttcaattggtcttatgcct
gaagactggggcggtgacatcccaatggttcagattagtgctctcaagggggataacata
gatgatttgctagaaactgttatgcttgttgctgagttacaagagttgaaggctaatccg
catagaaatgcaaagggtacagttattgaggcaggtcttgataaatccaaaggtccaata
gctacatttattatacagaatggcacacttaaaagaggggatgttgtggtttgcggagaa
gcctttggaaaggttcgggctttatttgatgatggtggaaaacgagtggatgaagctgga
ccatctattcctgtacaggttattggattgagtaacgtaccaaaagctggcgatgaattt
gaggctgttgcctctcttgatattgcacgtgaaaaggcggaagcatgtgctgaattattg
cgaaatgagcgaataacagccaaggctggagatggcaagattacactatcttccttagca
tcagctgtttcatcaggaaggctgtctggaatagacttgcaccaactgaatattatatta
aaagttgatgttcagggatctgttgaagctgtccgacaagccttacaggtgctccctcaa
gataatgtcaccttgaagttcctcttacaagcaacaggggatgtaagctcaagtgatgtt
gatcttgccattgccagtgaagctattattttaggatttaatgtcaaagcaccgggttct
gtcaagagcaatgcagaaaacaaaggtgttgagattcggctatatagagttatatatgat
cttattgatgatgtacgaaatgcaatggaaggacttctagagcctgttgaggaacaagaa
acaattgggtcagcagtagttcgggctgtatttagcagtggaagcggccgtgttgctgga
tgcatggtaacagatgggaaagtagtgaaaggctgtggtgttaaggttattcgaaagcga
aagacaatccatgttggcgttctcgattccttgagacgagtaaaggaacttgtaaaagag
gtaagtgctgggctagagtgtggtattgcaatggaagattatgatgattgggaggaagga
gatactattgaagccttcaacacagtcgagaagaagcggacccttgaagaggcatcggct
tcgatggcagctgcactggaacatgcaggtattaatgtgtag
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