Ricinus communis (castor bean): 8278154
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Entry
8278154 CDS
T01087
Name
(RefSeq) U-box domain-containing protein 13 isoform X1
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
8278154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rcu04121
]
8278154
Enzymes [BR:
rcu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
8278154
Ubiquitin system [BR:
rcu04121
]
Ubiquitin ligases (E3)
U-box type E3
8278154
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
PUB10_N
ARM_PUB
ARM_ARMC5
U-box
HEAT_2
PUB2_N
Neurochondrin
zf-RING_UBOX
MLKL_N
zf-Nse
Arm_2
zf-C3HC4_4
KAP
zf-C3HC4_2
zf-C3HC4
MCAfunc
HEAT_EZ
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
8278154
NCBI-ProteinID:
XP_002534105
UniProt:
B9T786
LinkDB
All DBs
Position
8:complement(18035389..18040355)
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AA seq
662 aa
AA seq
DB search
MEDQEKGALVESLIETVNEIASISEYRSTVKKQYCNLARRLKLLIPMFEEIKESKEPIQE
QTFKALLALKVALHSAKDLLRDGSEGSKIYLVLKREQIMDKYHEVTAQLEQALSGISYEN
LDISDEVKEQVELVLAQFRRAKGRADTPDVELYEDLLLLFNKSNDAAIDPAVLRRSSEKL
QLRGIADLTQESLALHEMVAATGGDPGANIEKMSMLLKKIKDFVQTENPNMDAPGREKNL
PPSSSGQTSTNTNHKAPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLEAGHVTC
PKTQQNLNSTALTPNYVLRSLIAQWCEANGMEPPKRPSSSRSNKTTSAYSPAERTKIENL
LHKLTSGSPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVDLLSTPDSRTQEHAVTA
LLNLSICEDNKGSIISAGAVPGIVHVLKKGSMEARENAAATLFSLSVVDENKVTIGSSGA
IPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMRLLTEPGGGMVDEA
LAILAILASHPEGKSAIGAAEAVPVLVEVIGNGSPRNKENAAAVMVHLCAGDQKHLAEAQ
ELGIMGPLVDLAQTGTDRGKRKARQLLECMSRFVEQQKQAQAQAEAQTQQPQPSSTANSA
DS
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcaagaaaaaggagcgttggtggagagtttgatagagacagtgaatgaaata
gcatcgatttcagagtatagaagtacggtgaagaaacagtactgcaatttagcaagaaga
ttgaagctattaataccaatgtttgaagagattaaagaaagtaaagaaccaattcaagaa
caaactttcaaagctttacttgctttaaaagttgctctgcattccgctaaagatttgctt
cgtgatggcagtgaaggcagcaagatttacctggtcttgaagagggaacaaattatggat
aaataccatgaggtgacagctcaattggaacaagccctaagtggaatttcatatgaaaac
cttgacatatcagatgaagttaaagaacaggttgagcttgtccttgctcagttcagaaga
gccaaagggagggctgatactcctgatgttgagctctatgaagatctcttattgcttttc
aacaagagtaatgatgcagcaatagatccagctgtcctaagaagatcatctgagaagtta
cagttgaggggcatagctgacctaacacaagaatcactagctctgcatgaaatggttgct
gctactggtggtgatcccggtgcaaatattgagaaaatgtcgatgctgttgaagaaaatt
aaagattttgtgcaaacagaaaaccccaacatggatgctcctggaagagagaagaacctc
cctccaagcagcagtggacaaacttccactaatacaaatcacaaggccccagttatacca
gatgacttccgatgtccaatatctttggaattgatgaaagatcctgttattgtttcaact
gggcagacgtatgagcgttcgtgcattgagaagtggctggaagcagggcacgttacatgt
ccaaagacgcaacagaatcttaatagtactgctctcacacccaattatgtactacgcagc
ctcatagctcagtggtgtgaagcaaatggcatggaaccaccaaaacgacccagcagttct
cgatccaacaaaaccacatctgcctactcacctgctgaacgtacaaagatagaaaatctc
ctccacaaactcacatctggtagccctgaagatcaacgatctgctgcaggtgagatacgt
cttcttgcaaagcgcaatgcagataatcgtgttgctattgctgaagctggtgcaattcct
ctccttgtggatctcctctcaacacctgattctcggacccaagagcatgcggttactgca
cttcttaacctatctatatgtgaagataacaaaggaagcatcatatcagctggggctgtt
cctggtatagttcatgtgctcaagaagggcagcatggaagcccgggaaaatgctgcagcc
acactttttagtctttcagttgtggatgaaaataaggttacaataggttcttcaggggcc
atccccccacttgtgacacttctaagtgagggtacgcagaggggtaaaaaggatgctgct
actgcacttttcaacttgtgcatctatcaggggaacaagggaaaggcagtgagggctggg
gttgtgcccacactaatgcgtctgctgacagaacctggtggtggcatggttgatgaagca
ttagccatattggcaatactggctagccaccctgaagggaagtcggccattggagctgca
gaggcagtgccggttttagtggaagttattgggaatggatctccaagaaacaaggagaat
gcagcagcagttatggtgcacctgtgtgctggagaccaaaaacatttggctgaagcgcag
gagcttggaataatggggccactagtagatttggcccaaactggcacagaccgaggaaag
aggaaggctcgacaattgctcgagtgtatgagcaggtttgtcgagcagcaaaagcaagct
caggcacaagctgaggcgcaaactcagcagccacagccatcatccacagcgaattctgct
gatagctga
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integrated database retrieval system
