Ricinus communis (castor bean): 8278281
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Entry
8278281 CDS
T01087
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rcu03036
]
8278281
Chromosome and associated proteins [BR:
rcu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
8278281
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
TRIP13_N
AAA
AAA_16
AAA_22
nSTAND3
AAA_18
AAA_14
Viral_helicase1
NPHP3_N
NACHT
AAA_5
AAA_30
AAA_28
TIP49
AAA_2
Cytidylate_kin
ABC_tran
ATPase_2
TsaE
AAA_7
RuvB_N
DUF815
RNA_helicase
AAA_11
AAA_24
AAA_33
AAA_17
Rad17
NB-ARC
nSTAND1
IstB_IS21
AAA_19
bpMoxR
KAP_NTPase
SLFN-g3_helicase
AAA_3
PduV-EutP
Mg_chelatase
SRPRB
ResIII
Sigma54_activat
AAA_13
nSTAND6
Cytidylate_kin2
NTPase_1
Motif
Other DBs
NCBI-GeneID:
8278281
NCBI-ProteinID:
XP_002511315
UniProt:
B9RAU0
LinkDB
All DBs
Position
4:27201840..27206068
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AA seq
460 aa
AA seq
DB search
MTASPTPMEISTLNPSTELHISDQNGAAQLQPSPSPILHHDKYLVSVEVCLKPSSTARVE
DIQSAVERMLEKRSLSYVDGPIPVPVDDPYLSDNVQRICICDSEEWAKNHEILLFWQVKP
IVHVFQLSEEGPCEELSGDGELSSFNEWILPAKEFDGMWESLIYESGLKQRLLRYAASAL
LFTEKRVDPFLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFNSRYPQCQLVEVNAHSL
FSKWFSESGKLVARLFQKIQEMVEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVV
NALLTQMDKLKCSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQE
LIRTGIISNFQDPDNLVLPNYPTLKEKMNGSAAQEAQTPVKLGKQLLEAAEACEGLSGRS
LRKLPFLAHAALSDPYSCDPSKFLSTMMDAARRERSELPD
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgactgcttctcctactccaatggagatctctacactaaaccctagtacagaactccac
atttctgaccaaaacggcgccgcacaactccaaccttctccttctccaattcttcaccac
gacaaatatctcgtttctgttgaagtatgcctaaaaccctccagcacagctcgcgttgaa
gatatccaatctgccgttgaaaggatgcttgaaaagaggagcttaagctatgttgatgga
cctattccagtacctgttgatgatccttatctttcagataacgtgcaaaggatctgtatt
tgtgactctgaggaatgggcaaagaaccatgagattcttttgttctggcaagtaaaaccc
attgtgcatgtctttcagcttagtgaggaagggccgtgtgaggaattaagcggggatggt
gaactatctagctttaatgaatggattcttcctgcaaaggaatttgatggcatgtgggaa
agtctaatttatgaatctggtctcaagcaaaggctattgcgttatgcagcaagtgcactg
ctctttactgagaagagggtcgacccgttccttgtgtcatggaatcgcattgtcctttta
catggacctcctgggactgggaaaacatccttatgcaaagcattggctcaaaaactttca
atccgatttaactccaggtaccctcagtgccaattagttgaagttaatgctcattcttta
tttagcaaatggttctctgaaagtggcaagctggttgcgagacttttccagaaaattcaa
gaaatggtggaggaagaaaacaatctggtatttgttttaattgatgaagttgaaagcctc
gctgctgctaggaaagctgctttatctggttctgaaccttctgattctattcgagttgtc
aatgcgctactgacccagatggacaagttgaaatgctcgccaaatgtaattatactgact
acatccaatataactgctgctattgatattgcatttgtggatcgagctgatatcaaagca
tatgtcggtcctccaactcttcaagctcgttatgaaattcttcggtcatgcttgcaggaa
cttatacgaactggaatcatatcaaatttccaggaccctgacaacctcgtgcttccgaat
taccctaccttgaaagagaaaatgaatggatctgctgcgcaagaggcacagacaccagta
aaattgggtaaacaattgcttgaagctgcagaagcatgtgaggggttaagtggaagatca
ttaagaaaacttccatttttggcacatgcagctctttcagacccatatagctgtgatcct
agtaagttcttgtcaacaatgatggacgcagcaaggagggagcgttctgagctacctgac
tga
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