Ricinus communis (castor bean): 8278751
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Entry
8278751 CDS
T01087
Name
(RefSeq) Fanconi anemia group I protein homolog isoform X1
KO
K10895
fanconi anemia group I protein
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
8278751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcu03400
]
8278751
DNA repair and recombination proteins [BR:
rcu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
8278751
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCI_S4
FANCI_S2
FANCI_HD2
FANCI_HD1
FANCI_S1
Motif
Other DBs
NCBI-GeneID:
8278751
NCBI-ProteinID:
XP_048234983
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All DBs
Position
9:complement(1664149..1671481)
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AA seq
1266 aa
AA seq
DB search
MATATTATTSGRDQNLPPPPLTDTEIINLAYKNHLHPYILSTSSIPTLISYLKTRSHSSV
ALTDYTLSLLSLISLSPHNPSLSSLLSSLLSTYTNLFLSLIIPRDSNSLKTINLFTTLLT
YIPVNDLDSIADSILNHLSSLVTSEDTQILEIIPGCLSCLYSEKGKDSVNLILDKIIEIQ
WSKVLLIKMVSLGREFLQFLDKMRARVFLENVFNGMKGVDLQDLPSLAYQLLVLASKGFN
KREVIEGILRFFGSDLGSKGSSIVRQIEGTVLLHVNFAVKQDPSLGQEVIRLVKLGCRAL
NHFTVSILLSIARVRRFKENSIGVLKTAVLSAYRDYKFSSDIMWLADDLKEEYLQNVQVL
EKAILRAVNESNCGREHIVPTVVQFSFVLLESLEGGNHRDLCNFNGLLGVEALSVQMLKT
LFEVHDMARNEIIEQCKFRILSVRPEQSTPIIRLLAFLVRSCPYPMLEHVSRLKELLDYF
TFMNGNVASDLVTALVPLIKFNRDLRDYTILVVRKAMFRQEDAVRLAATNAIVSVILAEK
QSNRDGFSFQDSSSQAGCSQPAEIPSGHGGGLFRELSGLLQRCLYQKAKVKEVMYHGLLK
LVLVDPASAAAVFDFLWPHFLRFFKEDSDVQLGISSCIKSESGKVVIEEPLDCLLSCVSW
ILLLQPHDKTDHPDSSWACFGFSLSQEIEAGRSLSGESFSKAFLKIRDFLKKGNLEDIPS
PTSDEEQGKCHALLLSGLIEVVLNSIASELETATGLKRINLQKEILEIVNFHSTLKKYTS
ARQSCGVKRGSQQATTLDVPGNSFFSNNTMTQEQIPFLATSSLCQLMKTTLDLCNNEWFK
GSTASQNHSQSSSSGTLKCFKIVPFVLNSSLHHIRSYATGRKEDPIKNLIYGEIKLMAPP
LLKLICLLNSGPKFATDHKKEMKGKNDFEDRKEHLHLALLCLKELIAISLKNSNSSGLLE
DLLSVSTLEYELDEEFEEASRIDDHQIRIKVLLIVKILRPLFAELLAQSSFNEIERYIHV
SQSGEHAPGLTVEDNLYLRAEAVVKVLSFFVLMNLKDPQAEHLLRLIAKFYKHLAQISRL
RIATKGCKQLLPTPTFQRLVEVTCKKLTVPLYKFVAEIQRVQQEKPNTKGIINKIKRENK
CIPELIFQIEDYEKYLIRLSKASKVNLLKHAKRSTSRDFRILDPPNDKEEADLNHEHNND
DAVGANVDRSHEDSEDNVSDKFSSRRKDSPEIAEESESEGEDGCGLPNGKRMRRDRVVQD
TDDDEA
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgctacaactgccactactagcggcagagaccaaaatctaccacctccacca
ctcactgacacagagataataaacctagcatataaaaaccacctccatccatatattctc
tctacatcatcaattcctactctcatctcctacctcaaaactcgctcgcattcttcagtc
gccctcaccgattacacactctctctcctatctctcatttccctctctccacacaatcct
tcgctctcttcccttctatcatctctcctttccacttacactaatcttttcctttctctc
ataatccctcgcgattccaattccctcaaaacaatcaatctctttaccactctattaact
tacatcccggtcaacgatctggattcaatcgctgactcgattttgaatcatttgtccagt
ttagtaacttctgaggatacacaaatactcgaaattattcctggttgtttaagttgtttg
tacagtgagaaagggaaggattctgttaatttaattttggataaaattattgaaattcaa
tggtcaaaagtattgctaataaaaatggtgtcacttggaagggagtttctacagtttctt
gataaaatgagagcaagggtgttcttggaaaatgtttttaatggaatgaaaggagtggat
ttacaagacttgccttcgcttgcatatcagttattggttttggcttcgaaagggtttaac
aagagggaggttattgaagggattcttaggttctttggctctgatttgggatcgaaaggt
agttccattgttaggcaaatagaaggaactgtgctgcttcatgttaattttgctgtgaag
caggatccttccttagggcaagaggttataaggcttgtgaaattgggttgtagggctctt
aatcattttactgtttctattttattgtctattgccagggtcaggaggtttaaagaaaac
tccattggggttttgaaaactgcagtgctttctgcttaccgtgattacaagttttctagc
gatataatgtggttagcagatgatttgaaggaagagtatctgcaaaacgtacaagtactg
gagaaggctatattaagagctgttaatgaaagcaactgcggaagggagcacattgtacct
acagttgtgcagtttagctttgtcttgctagagtcattggaaggcggaaaccacagagac
ctatgcaattttaatggtcttttgggtgttgaagctcttagtgttcagatgctaaaaact
ttgtttgaggtccatgatatggcaagaaatgagattattgagcagtgcaaatttcgcatc
ctttctgtgaggccagaacaaagcacgccaatcattaggctgcttgcttttctggttcga
agctgtccttacccaatgttggagcatgtttcccgtctaaaggaattgttggattatttt
acttttatgaatggaaacgttgcctccgatcttgttaccgctctggtgcccctcataaag
tttaaccgtgatcttcgggattacaccattttagttgttcgtaaagccatgtttaggcaa
gaagatgccgttcgtcttgcggcaacaaatgctattgttagtgttatattggctgaaaag
caatctaacagagatggcttttcttttcaagactcatcaagccaagctggttgcagtcag
ccagctgaaatacccagcggtcacggtggaggtctcttccgagaattgagcggtctactg
cagagatgtctttatcagaaggcaaaagtgaaggaagtcatgtatcatggtcttttgaag
cttgtcttggtggatccagcaagtgcggcagctgtttttgattttctctggcctcacttt
cttcgctttttcaaggaggatagtgatgttcaacttggaattagtagctgcataaaatca
gagagtggcaaggttgtcattgaagagcctctagattgtcttctatcttgtgtttcttgg
atcttactacttcaaccacatgataaaactgatcatccagattcttcatgggcatgtttt
ggtttttccctttctcaagagattgaggcaggaagaagtctatctggcgagtctttctcc
aaggctttcctgaagatacgggattttctaaagaagggaaatttggaagatattcctagt
ccaacttcagatgaagaacaaggaaaatgccatgcattgcttttatcagggcttattgaa
gtggtattgaatagtattgcttctgagttggagacagctacaggtttgaagaggatcaat
ctccaaaaggaaattctcgagatagttaattttcattcaacactgaagaagtatacatct
gcaaggcagagctgtggtgtcaaaagagggagtcagcaagctactactcttgatgtgcct
ggtaatagttttttcagcaataacacaatgactcaagaacagattccgtttttggcaact
tcaagtctttgtcagctaatgaaaacaacattggacctgtgcaataatgaatggtttaaa
ggctccacagcttcccagaaccatagccagtcatcttcaagtgggacattgaaatgcttt
aagattgttccttttgtcctgaatagttcccttcatcatataagatcttatgccactgga
agaaaagaagatccaattaagaatctaatctatggggaaatcaaattaatggcaccgcct
ttgctgaaattgatttgcttgctcaattcagggccaaagtttgcaacagaccataaaaaa
gagatgaaggggaagaatgattttgaagaccgaaaggaacatcttcatttagcattattg
tgcttgaaggaattgattgcaattagtttgaagaattcaaactcctctgggttgcttgaa
gatttgttgtcagtctccacactcgagtatgaattggatgaagaatttgaagaagcttcc
aggattgatgatcaccaaataagaatcaaagtgttactcatcgtcaaaattctgagacca
ctgtttgctgagcttcttgcacaatcatcttttaatgaaatcgagagatacattcatgtt
agtcagagtggagaacatgctccaggattgaccgttgaggataatctttacttgagggct
gaagcagtggtgaaagtattatctttctttgttttgatgaacctaaaggaccctcaagca
gagcatctattaagattgattgcgaagttttacaagcatttggctcagatttcaaggctt
aggattgctactaagggatgcaagcaacttctacctactccaactttccagaggcttgta
gaagtaacctgcaagaagcttacagttcctctttataaattcgttgcggagattcaaagg
gtacaacaagaaaagcctaatactaagggtatcattaacaagattaaaagggagaataaa
tgcatacctgagctgatcttccaaatagaagattatgagaagtatctcatccggctcagc
aaggcaagtaaagtcaatttactgaagcatgccaagcgtagcacttccagggatttcaga
atattagatcctcccaacgacaaggaagaagctgatttaaatcatgaacataataatgac
gatgcagttggtgctaatgtggatagatcacatgaagattccgaagataatgtatcagac
aaattttcctcacgacgaaaagacagtcctgagattgcagaggaatctgagtccgagggc
gaggatggatgtggtttgcctaatggcaagagaatgaggagggatagagttgtgcaagac
actgatgatgatgaagcataa
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