Ricinus communis (castor bean): 8278778
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Entry
8278778 CDS
T01087
Name
(RefSeq) phospholipase D zeta 1 isoform X1
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00564
Glycerophospholipid metabolism
rcu00565
Ether lipid metabolism
rcu01100
Metabolic pathways
rcu01110
Biosynthesis of secondary metabolites
rcu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
8278778
00565 Ether lipid metabolism
8278778
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
8278778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcu04131
]
8278778
Enzymes [BR:
rcu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
8278778
Membrane trafficking [BR:
rcu04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
8278778
Endosome - Golgi transport
Others
Others
8278778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc
PLDc_2
PH
FDX-ACB
Motif
Other DBs
NCBI-GeneID:
8278778
NCBI-ProteinID:
XP_015573380
LinkDB
All DBs
Position
9:complement(1501030..1511427)
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AA seq
1122 aa
AA seq
DB search
MASSEQLMNGSNGPRYVQMQSEPSTPQHNQQQLQQQHPSSMLSSFFSFTHGVTPESTRIF
DELPTATIVSVSRPDAGDISPVLLTYTIEVQYRQFKWQLSKKAAQVFYLHFALKRRAFFE
EIHEKQEQVKEWLQNLGIGDHTPVVQDDDDADDETILLHNEESAKNRNVPSRAALPVIRP
ALGRQHSMSDRAKVAMQEYLNHFLGNLDIVNSREVCKFLEVSKLSFSLEYGPKLKEDYVM
ARHLPPIPTNDDSGKCCACHWFSCCNDNWQKVWAVLKPGFLALLADPFDAKPLDIIVFDV
LPASDGSGEGRISLAMETKERNPLRHAFKVTCGVRSIKLRTKTGARVKDWVAAINDAGLR
PPEGWCHPHRFGSFAPPRGLTEDGSQAQWFIDGMAAFDAIASSIEDAKSEIFICGWWLCP
ELYLRRPFHAHASSRLDDLLEAKAKQGVQIYILLYKEVALALKINSVYSKRKLLSIHENV
RVLRYPDHFSSGVYLWSHHEKLVIVDYQICFIGGLDLCFGRYDTREHRVGDCPPFVWPGK
DYYNPRESEPNSWEDTMKDELDRKKYPRMPWHDVHCALWGPPCRDVARHFVQRWNYAKRN
KAPYEEAIPLLMPQHHMVIPHYRGSSKDLEVETKNGEDDSKGIKREDSFSSRSSLQDIPL
LLPQEAEGTDGSGRGPKLNGLDSTPGRSRSYAFRKSKFEAVVPDTPMKGFVDDHNILDLH
VKISPDILPQSGTKTSHLEWWETQERGDQVGFGDETGQVGPRTSCRCQVIRSVSQWSAGT
SQVEESIHCAYRSLIEKAEHFIYIENQFFISGLSGDEIIRNRVLESLYRRIMRAHNEKKC
FRVIIVIPLIPGFQGGLDDSGAASVRAIMHWQYRTICRGQNSIFHNLYDVLGPKTHDYIS
FYGLRAYGKLFDGGPVATSQVYVHSKIMIIDDCATLIGSANINDRSLLGSRDSEIAVLIE
DKEMVDSFMGGRHWKAGKFSLSLRLSLWSEHLGLNAKEMKQIIDPVIDSTYKDIWIATAK
TNTTIYQDVFSCIPNDLMHSRAALRQNMAFWKERLGHTTIDLGIAPEKLESYENGDIKKH
DPMERLQAVRGHLVSFPLDFMCREDLRPVFNESEYYASQVFY
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgtcggagcagttaatgaacggtagtaatgggccgcgttatgtccaaatgcaa
tcagagccgtccacgcctcaacataaccagcagcaactgcaacaacaacatccatcgtcg
atgttgtcgtcgtttttctcttttactcacggagtcacgcctgagtcgactcggattttc
gatgaattacctacggccacgatcgtctcagtttctagacctgatgcgggtgatatcagt
cccgtccttttaacttacaccatcgaggttcaatacagacagtttaagtggcaattatcg
aagaaagcagcgcaagtattttatttacatttcgcattgaagaggagagcattttttgag
gaaatacatgagaagcaagagcaggttaaagaatggcttcaaaatctaggaataggagat
catacgccagtagttcaagatgatgatgatgcagatgatgagactattctgttgcataac
gaagaaagtgcaaaaaacagaaatgttccatcgagagctgctttgccagttattcgtcca
gcattgggaaggcagcattccatgtctgatagagcaaaggttgcaatgcaagaatatttg
aatcactttttaggcaatttggatattgtcaactcccgagaggtttgcaaatttttggag
gtctctaaattgtcattttctctggaatatggccctaagctgaaagaagattatgttatg
gcaaggcatttaccaccaattccaacaaatgatgattctgggaaatgttgtgcttgtcat
tggtttagttgctgtaatgacaactggcagaaggtgtgggctgtactaaaacctggattc
ttggccttgctggctgatccctttgatgccaaacctttagatataattgtgtttgatgta
ctaccagcttcagatggtagcggtgaaggcagaatatcattggcaatggaaacaaaggaa
cgcaatcctttgcgtcacgcatttaaggtcacatgcggtgttcgaagcataaagctaaga
acgaagactggtgctagggttaaagattgggttgctgcaatcaatgatgctggacttagg
cctccagaaggttggtgtcatcctcatcgctttggctcctttgctcctcccaggggttta
actgaagatggtagtcaggctcaatggttcatagatggtatggccgcttttgacgctatt
gcttcatctattgaggatgctaaatcagagatatttatttgtggctggtggctatgccca
gaactttatctacggcgtccttttcatgcacatgcatcttcaaggcttgatgatttgctg
gaagccaaagctaagcaaggagttcagatatacattcttctctataaagaggtggctctt
gctcttaaaatcaacagtgtatatagcaagagaaagcttcttagcatacacgagaatgtg
agagttctacgttatcctgatcacttttctagtggtgtttacctttggtcccaccatgaa
aaacttgtcattgttgattaccagatttgctttattggaggattagacttgtgctttggc
cgttatgacacacgtgaacaccgagtgggtgattgccctccttttgtctggccaggaaag
gattactataatccaagggagtctgaaccaaattcttgggaagatacaatgaaagatgaa
ctggatcgtaaaaagtatcctcgaatgccttggcatgatgtccactgtgccctatgggga
ccgccatgtcgtgatgtagctaggcactttgttcagcgttggaactatgcaaagagaaat
aaggccccttatgaggaagccattccactacttatgccgcagcatcacatggttattcca
cactataggggaagcagcaaggacctggaggttgaaactaagaatggtgaagatgatagt
aaaggaattaaaagggaggactctttttcctctagatcatctttacaagatatccctctg
ctattgcctcaagaagcagaggggactgatggctctggtagaggcccaaaattgaatggg
ttggactctaccccaggcagaagtcgctcttatgctttccgcaaatcgaaatttgaggct
gttgttccagatacgccaatgaaaggtttcgtagatgatcataatatcttggatcttcat
gtgaaaatatctcctgacatattgccacagtctggcactaaaacttcacatttagagtgg
tgggagacccaagagcggggagatcaggttggttttggagatgaaactgggcaagttggt
ccacgtacttcttgtcgttgtcaggttataaggagtgtgagccagtggtctgctggaaca
agtcaagttgaagagagcatacattgtgcttatcgttctctcattgagaaagcagagcat
ttcatatatattgagaatcaattttttatatcaggtctttcaggagatgaaattatacgg
aatcgtgtgttagaatccttgtatcgacgaattatgcgagcacacaatgagaagaagtgt
tttagggttattattgttatacctctgattcctggcttccagggaggtttagatgatagt
ggagctgcatctgtgagagcaataatgcattggcaatatcgaaccatttgcagaggacaa
aattcgatattccataacctttatgatgttctgggtccaaaaacacatgattatatttct
ttctatggtcttagagcttatgggaaactttttgatggtggtccagtcgccaccagtcag
gtgtatgtgcatagtaaaattatgataattgatgactgtgcaacgctaattggatcagct
aatattaatgataggagtctgcttggttcgcgagattctgagattgctgtacttattgaa
gacaaagagatggttgactcatttatgggagggagacactggaaagctggaaaattctct
ttgagtcttcgcctttcattgtggtctgaacatcttggtctcaatgccaaagagatgaag
caaataatagatccagtaattgattcaacatacaaagacatttggatcgcaactgcaaag
acaaataccaccatctaccaggatgtattttcttgcattcccaatgatcttatgcattcc
agagctgcacttagacaaaacatggccttttggaaggaaaggcttggccacaccactatt
gatttaggaatagcccctgaaaagcttgaatcatacgaaaatggagacataaaaaaacat
gatcccatggagagattgcaggcagtgcgtgggcatcttgtttctttcccgttagatttc
atgtgcagggaggatctaagacctgtatttaatgagagtgaatattatgcatctcaagtg
ttctattag
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