KEGG   Ricinus communis (castor bean): 8279030
Entry
8279030           CDS       T01087                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    8279030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rcu03019]
    8279030
Messenger RNA biogenesis [BR:rcu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     8279030
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     8279030
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 8279030
NCBI-ProteinID: XP_002532727
UniProt: B9T3A8
LinkDB
Position
8:complement(6802628..6806544)
AA seq 128 aa
MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERVIVGDL
YCDIPLGLYIIRGENVVLIGELDLEKEELPPHMTRVSAAEIRRAQKAERDATDLKGTMRK
RMEFLDLD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcttgggcaggcccggaagatatctatctttctacttctcttgctagctatcttgat
aagaagctacttgtgctactgcgagatggtcggaagctcatgggaatacttcgttctttt
gaccaatttgctaatgccgttcttgagggtgcatgtgaaagagttattgttggtgacctc
tattgcgatatccctttaggtctatacattattcgaggcgagaatgttgttttaattgga
gagctggatttggagaaagaggaacttcctccacatatgactcgtgtttcagcagcggaa
attagacgggcgcaaaaagccgaaagggatgctacggatctaaaaggtacaatgaggaag
agaatggaattccttgatttggactag

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