Ricinus communis (castor bean): 8279077
Help
Entry
8279077 CDS
T01087
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 27 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rcu01002
]
8279077
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcu04131
]
8279077
04121 Ubiquitin system [BR:
rcu04121
]
8279077
Enzymes [BR:
rcu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
8279077
Peptidases and inhibitors [BR:
rcu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
8279077
Membrane trafficking [BR:
rcu04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
8279077
Ubiquitin system [BR:
rcu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
8279077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
F-protein
Cyanate_lyase
Motif
Other DBs
NCBI-GeneID:
8279077
NCBI-ProteinID:
XP_015583093
LinkDB
All DBs
Position
7:8941034..8947692
Genome browser
AA seq
563 aa
AA seq
DB search
MKNEIINSIISNLRHGYKSLSHLKWVSSSSGFHVPVAGALGVAGLILALIKDHNFDNLTR
LSWFSNRETHLQKLYLVPGLQNLGNNCFLNVILQALASCSYFQAYLQKVIGECDSSDTVG
YSESLQLTFALAALLEELSAFGKGKVVLSPRKVMLAMTEYIQNFSLRSQQDAEEAFLHLL
SSLREEFSDSYPADQSSLADSFDSSNCRILTPKRREILNEKERWQQHFLGPFDGILSSIL
ACQSCSSQISLNFQFFHSLPLLPVLESVATIMTGCRLEDCLKQFISAEQVENYNCSQCWH
IAAIKYLMLEGVKETEIEKLRRCSMQDSCTCHRLPHLEGLPWSNNFSRTLKQLSIARCPK
ILCIHLQRASINQFGELVKLQGHVSFPLILDILPFTLEKVQCQKRSPHLNYLNVQPDTRM
LNCDYGQSTCSKVLAADESQCNEHIKTFVGESILPQTKGCSNTMCTDMSSQANDKVGIPS
SVVPSQPLVYRLVSVVEHFGKTGGGHYTVYRSVISKSPKECTDETLNPSIPQWFCISDSD
VQSVSEEDVLAAEASILFYERIV
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacgaaataataaactcaatcatcagcaatttgaggcatggatacaaatcttta
tctcacttgaagtgggtatcatcttcttctggatttcacgtaccagtggctggtgctctt
ggtgttgctggtttgattttggctttaataaaagatcacaactttgataacttaactcga
ttatcttggttttctaatagagaaactcaccttcagaagctctatttagttcctggtttg
caaaatcttggcaataattgcttcttgaatgtcatattacaggctctagctagctgttca
tatttccaagcttatcttcaaaaggtgataggagaatgtgattcatcagacactgtgggg
tatagtgaaagtttgcagcttacatttgctttggctgctctattagaagaactatctgca
tttggcaaagggaaagttgtgttaagtccacgaaaagtgatgcttgcaatgaccgagtat
attcaaaatttcagtttaagaagccaacaggatgctgaagaagcatttcttcatctctta
tcatctttaagagaagaattttcagattcttatcctgcagatcagagttctctagcagat
tcttttgattcttctaattgtaggattctcaccccaaagaggagggaaatcctgaatgaa
aaagaaaggtggcagcaacacttccttggaccatttgatggaattcttagtagcatttta
gcttgtcaaagttgttcatctcagatttcgttgaattttcaattttttcatagcttacct
cttttgccagtccttgaaagtgttgctaccattatgactggatgtaggttggaggattgc
ttgaagcagttcatttccgctgaacaagttgagaattacaattgcagccaatgttggcat
attgctgcaataaagtatttaatgttagaaggagtaaaagagacagagattgaaaaactt
aggagatgtagcatgcaagattcctgtacttgccatagacttcctcatcttgaaggtttg
ccatggtctaataatttttcacgcacactaaagcaactaagcattgctcgttgtccgaag
attttgtgtattcatttgcaacgtgcttcaataaatcagtttggagaactagtcaaactt
caggggcatgtcagctttccattaattttggacattcttccattcacgttggaaaaggtg
caatgtcaaaaacgaagccctcatttgaactatttaaatgttcaacctgacacaagaatg
ctaaattgtgattatgggcaaagtacttgctcaaaggtcttagcagctgatgaatcacag
tgcaatgaacacataaaaacctttgttggagaatccattttgccccaaactaaaggctgt
tccaacaccatgtgtacagatatgagctcacaggctaatgacaaggtcggcatacctagc
tcagttgttccttcacaacctctggtataccgtcttgtatctgtggtggagcactttggg
aaaactggaggggggcattatactgtttatagaagcgtgatatctaagtcaccaaaggaa
tgtactgatgaaactctcaacccctccattccgcagtggttttgtatatcagactctgat
gtacaaagtgtttcggaggaggatgttttagctgcagaggctagcatacttttttatgag
agaattgtatga
DBGET
integrated database retrieval system
