Ricinus communis (castor bean): 8279098
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Entry
8279098 CDS
T01087
Name
(RefSeq) uncharacterized protein LOC8279098
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rcu03016
]
8279098
Enzymes [BR:
rcu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
8279098
Transfer RNA biogenesis [BR:
rcu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
8279098
Prokaryotic type
8279098
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
8279098
NCBI-ProteinID:
XP_002521488
UniProt:
B9S669
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Position
5:13681999..13688597
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AA seq
513 aa
AA seq
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MAKSLSLLFLLPKPTFCPILLSSKPKSLNRACILSSLSRTLFSTVSTPYPFQYDMIISRP
SQSQPPQSRSQPARVTKDDSDCSPEPESELGLDSWVDQKLSMDKSKRKYYNKRRKRMYGS
DSDDDTRNKDEGFVELKPEVAHFGSLHKREEELYMYDTFAYPWEKDKHYKMVYQLEKKYF
PDQCFDKAFLDHKDSNFSKNESVKRSSKRVVKRDTNGVGDREEDKGLVFFEEEKAEIESN
SEKNVAKDVTERKVEEFFKCLKKVPNKKNEIDTGEPYLVTRSTELPPRWDDTHGTVVLVN
KPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKVVDRYQGMIKGYSG
VFRLGEATSTWDADSPVIQREPWEHIKDEDIRKAAASFCGEIWQVPPMFSAIKVGGEKMY
EKARRGESIELSPRRISIFQFNIERSLEDRQNLIFRVVCSKGTYVRSLCADFGKALGSCA
HLTALRRDSIGEYSADDAWEFKELEEAITKNYF
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggctaaatccctttctctgctctttctccttccaaaacccacgttttgtcctatcctt
ttatcctcaaaacccaaatctttaaacagagcatgtatcttatcatcactttcccgaaca
ctcttctccaccgtttctacaccatacccatttcaatacgacatgattatcagccgccca
tctcaatcccaacctcctcagtcccggtctcaacccgcccgggtcactaaagacgactca
gattgctctcctgagcctgaatctgaactgggtcttgattcatgggttgatcaaaagctt
tctatggataagtctaagagaaagtattataataaaaggagaaaaagaatgtacgggtct
gattctgatgatgatactaggaataaagacgagggctttgttgaattgaagcctgaagtt
gcacactttggtagcttacataagagagaagaggagctgtatatgtacgacacatttgct
tatccgtgggaaaaagataagcattataagatggtttatcagttggagaaaaagtatttt
cctgatcaatgttttgataaggcatttcttgatcataaagattctaattttagtaaaaat
gaaagtgtaaaaaggagtagtaagagagtagtgaaaagagatactaatggggttggtgac
agagaggaagataaagggttggtgttttttgaggaggagaaggctgagatagaatcgaat
tcagagaagaacgtcgctaaagatgttacagagaggaaagtggaggagttttttaagtgt
ttgaagaaagttcccaacaagaaaaatgaaatcgatactggagaaccttatcttgttact
aggagtactgagcttccacccaggtgggatgatacacatggaactgtggttttggttaat
aagcctaaaggatggacttcatttacagtttgtggaaagctgcgccgcctggtcaaagtg
aaaaaggtggggcatgctggaacacttgatcctatggcaactggtttattaattgtatgt
gttggtaaagcaactaaggtggtagacagataccaaggaatgattaagggttacagcgga
gttttccgtttaggggaggcaacttcaacttgggatgctgattcgccggttatccagcgt
gagccttgggagcacatcaaagatgaggacataaggaaagctgctgcatctttttgtggg
gaaatttggcaagttcctccaatgttctctgccatcaaagttggaggtgaaaagatgtat
gagaaagctagaagaggagaaagtattgaactttcacccagaagaatttctatttttcag
tttaacatagagcgaagcttagaagacaggcaaaatttgattttccgagtggtatgctct
aaaggaacatacgttcgatcgttatgtgctgattttggaaaggctcttggcagttgtgct
cacttaactgctcttcgaagagattcaattggagaatactcggcagatgatgcatgggag
ttcaaagagctggaagaggcaataactaaaaattatttctag
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