Ricinus communis (castor bean): 8279112
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Entry
8279112 CDS
T01087
Name
(RefSeq) uracil-DNA glycosylase, mitochondrial
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
8279112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcu03400
]
8279112
Enzymes [BR:
rcu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
8279112
DNA repair and recombination proteins [BR:
rcu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
8279112
Prokaryotic type
8279112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Ig_TMEM131_2
DUF5783
Motif
Other DBs
NCBI-GeneID:
8279112
NCBI-ProteinID:
XP_015576219
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All DBs
Position
4:complement(13150211..13155431)
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AA seq
304 aa
AA seq
DB search
MASAAKTLRDFFQPAAKRLKVVSVSSSDPPRTLNLCTDSIGDSSSEQRSRIQFNKHRAKS
KRNLNHCLQLVSNSKSYVKLEELLVEETWVEALPGELQKPYAKTLCKFIEKEISCESEPI
YPPQHLIFNALNSTPFDRIKAVIIGQDPYHGPGQAMGLSFSVPEDVKVPSSLVNIFKELK
QDLGCSIPSHGNLQKWALQGVLLLNTVLTVRNHQANSHAKKGWEQFTDSVIRLISQRKEG
VVFLLWGNSAQEKSKLIDETRHYILKAAHPSGLSANRGFFGCRHFSKTNQLLEQKGNPPI
DWQL
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggctgcgaagacgctaagagatttctttcaaccagcagcaaagcgcctaaag
gtagtgtcagtctcctcttccgatcctccaaggacccttaatctctgtaccgattccatc
ggagattcttcctccgagcaaagatcccgcattcagttcaacaaacatcgcgcaaagtcc
aagcgaaatcttaatcattgtctccagttagtttccaactctaaaagctatgtgaaattg
gaggagctgttagtggaggagacttgggtggaagcgcttcctggggagctacagaagcca
tacgcgaagactctatgcaaatttattgagaaagagataagttgtgaaagtgaaccaata
tatccaccccaacatttgatcttcaatgccctcaattccacaccttttgatagaattaag
gctgtcattattggacaggatccttaccatggccccggtcaagcaatgggtctttccttt
tctgttcctgaggatgttaaggttccttcaagccttgttaacatttttaaggaacttaaa
caagatcttggctgttccattccttctcatggaaatcttcaaaaatgggctcttcagggc
gttctattgctcaatactgttcttacagttagaaatcatcaggcaaattctcatgctaaa
aaaggatgggaacaatttacagattctgttatcagattaatttcacagagaaaggaagga
gtcgtttttctcctttggggaaactctgctcaagagaaatccaagttaattgatgagaca
aggcattacattttgaaggcagcacatccttctggtttatctgcaaacagaggcttcttt
ggctgcaggcacttctctaaaacaaaccagcttctggagcaaaagggaaatcccccaata
gattggcagctatga
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