Ricinus communis (castor bean): 8279660
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Entry
8279660 CDS
T01087
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00900
Terpenoid backbone biosynthesis
rcu01100
Metabolic pathways
rcu01110
Biosynthesis of secondary metabolites
Module
rcu_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
8279660
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rcu01006
]
8279660
Enzymes [BR:
rcu01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
8279660
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
8279660
2.5.1.29 geranylgeranyl diphosphate synthase
8279660
Prenyltransferases [BR:
rcu01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
8279660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
8279660
NCBI-ProteinID:
XP_002529802
UniProt:
B9SUY3
LinkDB
All DBs
Position
8:3026005..3028315
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AA seq
345 aa
AA seq
DB search
MIFFSSVSSSPAPALYLPRKTPNVHHLSKLGIRIQCCSPTVSVSSQSKSTQFDLKTYWTT
LIAEINQKLDQAIPVQFPEQIYEAMRYSALAKGAKRAPPVMCVAACELFGGNRLAAFPTA
CALEMVHTASLIHDDLPCMDDDPSRRGQPSNHTIYGVDMAILAGDALFPLGYRHIVSHTP
TGLVPEPRLLRVIAEIARAVGSTGMAAGQFLDLEGGPSFVEFAQEKKYGEMSECSAVCGG
LLAGAEDDEIQRLRRYGRAVGVLYQVIDDVLEAKAMNKENEEKRRNGKSYVSLYGIEKAM
EVAEELRTQAKKELDGFAKYGDSVMPLYSFVDYAADRGFTIGELS
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgattttcttttcatctgtatcatcatcaccagctcctgctctctacctcccaagaaaa
acccccaatgttcatcacctctcaaagcttggaatccgaattcaatgttgttcaccgact
gtgtcagtttcaagccaatcaaaatcgacccagttcgatttaaagacttactggaccacc
cttatagcagagatcaatcagaagctagaccaagctattccagttcagttcccagaacag
atctatgaggccatgaggtattcagctcttgctaagggtgctaaacgggccccacctgtc
atgtgtgttgccgcttgtgagctctttggtggcaaccgcctcgctgccttccctactgct
tgtgctcttgaaatggtgcatacagcttcgttgattcatgatgatcttccttgtatggat
gatgacccttcacgccgaggccagccctcaaaccacacaatctatggtgttgatatggca
atccttgctggggatgcactttttcctcttggctaccgccacattgtctcccacacgccc
acaggtcttgttccggagccacgcctacttcgtgtgattgctgagattgctcgtgctgtg
ggatctacaggaatggctgcagggcagttccttgaccttgagggtggccccagtttcgtg
gagtttgctcaagagaaaaaatatggtgaaatgagcgagtgctctgcagtttgtggagga
ctactggctggtgctgaggatgatgaaatacaaagattaaggaggtacggaagagctgtt
ggagtattgtatcaagtgattgatgatgtactggaagcaaaagcaatgaataaagaaaat
gaggagaagagaaggaacgggaagagttatgttagcctatatgggattgagaaggcaatg
gaggttgcagaagagctgagaacacaggcaaagaaggaattggatgggtttgcgaagtac
ggtgatagtgtcatgccactatatagctttgtggattatgctgcagatagaggtttcact
attggagagttgagttaa
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