Ricinus communis (castor bean): 8279699
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Entry
8279699 CDS
T01087
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
8279699
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rcu01009
]
8279699
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8279699
03036 Chromosome and associated proteins [BR:
rcu03036
]
8279699
Protein phosphatases and associated proteins [BR:
rcu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
8279699
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
8279699
Chromosome and associated proteins [BR:
rcu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
8279699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
P2R3B_EF-hand
DUF4187
Motif
Other DBs
NCBI-GeneID:
8279699
NCBI-ProteinID:
XP_002529841
UniProt:
B9SV22
LinkDB
All DBs
Position
7:23677235..23685558
Genome browser
AA seq
545 aa
AA seq
DB search
MDIDSVGADGGCGDASYLDTDLLQLPEVSPFVLKASPQLAENLFSQWLSLPDTTRLVKSL
IDDAKVGNPINILGISTSSNFGGANSLPSMFPAGSAPPLSPRSLSGSPRTSKQKTSPSSL
RSPLKVVREPVREVIPQFYFQNGRPPANELKEQCLSRIDHFFSNHPDGLQINEFKSLTKE
VCKLPSFFSSALFRKIDADCSGVVTRDKFIKYWVDGNMLAMDITTCIFHVLKQPENNYLT
QADFKPFLRELLATHPGLEFLQTTPEFQERYAETVIYRIFYHINKSGNGRLTLRELKRGN
LIAAMQHADEEEDINKVIRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNHALTYR
IVDRIFSQVPRKFTSNFEGKMGYEDFVYFMLAEEDKSSEPSLEYWFKCIDLDGNGVLTRN
EMQFFYEEQLHRMECMAQEAVVFEDVLCQIVDMIAPEKENYITLQDLKGSKLSGNVFNIL
FNLNKFMAFESRDPFLIRQEREDPTLTEWDRFAHREYIRLSMEEDVEDVSNGSVDVWDES
LEAPF
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggatattgatagcgttggtgctgatggtggttgtggggatgcttcttacttggacact
gacttattgcagcttccagaagtgtctccatttgtgcttaaagcaagtcctcagcttgct
gagaatttgttctctcagtggctttcgcttcccgatacgactcgactggtgaaatctttg
attgatgatgcaaaagttggcaatcctattaacatccttgggatttccactagttcaaat
tttggtggggccaattcattgccttccatgttccctgctggcagtgcacctccactttcg
ccaagaagtttgtctggttctccacgcacttctaagcagaagacaagcccttcttccttg
cgttccccattaaaagtagttagagaaccagtgcgagaagtcatacctcagttctatttt
caaaatggtcgtccaccagcaaatgaactgaaagaacaatgtctctctagaattgatcac
tttttcagtaatcatccagatggtttacagataaatgagtttaaatcccttacaaaagaa
gtttgcaaactgccatcattcttctcctctgcactgtttagaaagatagatgctgattgc
agtggggtagtgacaagggataaattcattaagtattgggtggatggcaatatgcttgcg
atggatataactacttgtatattccatgttctaaagcagccagaaaacaattaccttaca
caggctgacttcaaaccttttctccgagaacttttggcaacccatccagggttagaattc
ctgcagacgacacctgaatttcaggaaagatatgctgaaactgtcatatacagaatattc
taccatatcaataaatcaggaaatggacgtcttacccttagggagctgaaacgtggtaat
ctcattgctgccatgcaacacgcagatgaggaagaggacattaataaagtcataaggtac
ttctcttatgaacatttctatgttatatactgcaagttctgggagctagatacagaccat
gatttcttaattgataaggagaatctcattagatatggcaatcatgcccttacctacagg
attgttgatagaatattttcacaggtgccaagaaaatttactagcaactttgaaggaaag
atgggttatgaagattttgtttactttatgctcgcagaggaggacaaatcatcagaacct
agtcttgaatattggttcaaatgcatagatttagatggaaatggtgtgttaactcgcaat
gaaatgcaattcttctatgaggagcagctgcatcgtatggaatgtatggcccaggaagca
gtggtatttgaggatgtgttgtgccaaatagttgatatgattgcaccagagaaagaaaat
tacatcacactgcaggatttgaaaggaagcaagctttcagggaacgttttcaatatactt
ttcaatctgaataagttcatggcttttgaaagccgtgatccatttctaattcgccaggaa
cgtgaggatccaactttgacagagtgggatcgctttgcacatagggaatacatcaggctt
tcaatggaagaagatgttgaggatgtctcaaatggaagtgtagatgtttgggatgaatca
cttgaagctcctttctga
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