Ricinus communis (castor bean): 8279852
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Entry
8279852 CDS
T01087
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00900
Terpenoid backbone biosynthesis
rcu01100
Metabolic pathways
rcu01110
Biosynthesis of secondary metabolites
Module
rcu_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
8279852
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rcu01006
]
8279852
Enzymes [BR:
rcu01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
8279852
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
8279852
2.5.1.29 geranylgeranyl diphosphate synthase
8279852
Prenyltransferases [BR:
rcu01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
8279852
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
8279852
NCBI-ProteinID:
XP_002532570
UniProt:
B9T2V1
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All DBs
Position
9:7654718..7655896
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AA seq
344 aa
AA seq
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MNYFTKYCTFFSTFLPIHHHYSHSPNTSAHSLSPSSMAGALPYIPGNPVGRGVFRRSFGY
GRGGALFSRRPVACVMSNSSKIDYWTCINADIETHLKEAIPVRPPVVVFEPMHHLTFAAP
RSFAPALCIAACELVGGSRDQALAAASALRLMIAAAFTHENIPLTDRPRPSARPMFHHTF
GPNIELLTGDGMIPFAFELLAQLNNPAQDNSDRILRVMIEISRAMGSQGMVEGQYNEFQY
DQSVGDELFHVAWLRDVCKKKEGASHACAGACGAILGGGNEEEIEKLRRYGLYVGTIQGI
YNKVEGNEEWSLKEVNKLRDLALKELKDFNEEEKVRAICSLVEN
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaattatttcacaaagtattgtacgtttttctcaactttcttgcccatccaccaccac
tattcccactctccaaacacctccgcacacagtctcagcccatcatccatggccggagct
ctaccttacatccccggcaatccggtgggtcgtggtgttttccggcgatcttttggttat
ggtaggggtggtgcattattttctcgtagacctgtagcttgtgtcatgtccaattccagt
aagattgattactggacatgtataaatgctgacattgaaacccaccttaaggaggccatt
cctgtacggcctcccgtcgtcgtgttcgagcccatgcatcatttaacctttgccgccccg
cggagtttcgctccggccttgtgcatagctgcttgtgagcttgttggtggcagccgcgac
caagctttggctgcagcatctgctctacgtctaatgattgctgctgctttcacgcacgag
aacatcccgctgacggatcggcctaggcccagtgctaggcccatgtttcatcatacattt
ggaccaaatattgagcttctcactggtgatggaatgatacctttcgcgtttgagttattg
gcccagttgaataacccggcgcaggataattcggaccgaattttacgggtgatgatcgag
atctcacgtgccatgggttcgcaagggatggtcgaagggcaatataatgaatttcaatac
gatcaatccgtcggggatgaattattccacgtggcatggctccgagacgtctgtaagaag
aaagaaggcgcgtcacacgcttgcgcgggggcgtgcggggcaatattaggaggtggaaat
gaggaggagatagaaaaattaaggaggtacggactttatgtaggtacgatacaaggaata
tacaataaggttgaaggaaacgaagaatggtcattaaaagaggtaaataagctaagagat
ttggctcttaaagaattgaaagatttcaatgaagaagaaaaggttagagcaatttgtagt
cttgttgagaactag
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