Ricinus communis (castor bean): 8280096
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Entry
8280096 CDS
T01087
Name
(RefSeq) serine/arginine-rich splicing factor SR34A
KO
K12890
serine/arginine-rich splicing factor 1
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
8280096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rcu03041
]
8280096
Spliceosome [BR:
rcu03041
]
Common components
Common spliceosomal components
SR proteins
8280096
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
Transformer
RRM_occluded
RRM_3
Motif
Other DBs
NCBI-GeneID:
8280096
NCBI-ProteinID:
XP_002519893
UniProt:
B9S1M8
LinkDB
All DBs
Position
5:complement(28101471..28106111)
Genome browser
AA seq
264 aa
AA seq
DB search
MSGRFSRTIYVGNLPSDIREWEVEDLFYKYGRILDIELKIPPRPPCYCFVEFENTRDAED
AIRGRDGYNFDGCRLRVELAHGGRGQSSSDRRGGYGGSGGGGSGSGGRYCISRHSEFRVI
VRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSDGTFGIVDYTNYEDMKYAIRKLDDTEFR
NPWARAYIRVKMYENSPSRSRSRSRSRSRSPRRNRSKSLERSPSRSVSKSRSASPVKSSR
AKSGSRSRSRSVSGSPNKAPSGSG
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgagtggccgcttttctcggacaatctatgttggcaacttgccctcagatataagagaa
tgggaagttgaggatctcttttacaagtatggtcgtatactagatattgagttgaagatt
ccacctcgccctccatgttattgctttgttgagtttgaaaatactagggatgcagaagat
gcaatcaggggtcgagatggatataactttgacggctgccgattgagggttgagcttgcc
catggtggtagagggcaatcgtcaagtgatcgtcgtggtggctatggcggcagcggcggc
ggcggcagcggcagtggtggtcgatattgcatctcacgtcattctgaatttcgagttatt
gttcgtgggctcccgtcttctgcttcttggcaggatttaaaggatcatatgagaaaggca
ggtgatgtgtgctttgctgaagtttcccgtgacagtgatgggacttttggtattgttgat
tatactaattatgaagacatgaaatatgctattcggaagcttgatgacactgagtttaga
aatccatgggctagagcttatattcgggtcaagatgtatgagaatagcccctcaaggagc
cgaagtagaagccgcagcagaagcagaagtccaagaaggaatagaagcaaatccttggaa
cgatctccttcgagatcagtgtcaaagtctagatcagcatcacctgtaaagtcatccaga
gcaaaatctgggtcaaggtcgaggtcgaggtcggtttcagggtctcccaataaggcaccg
tccggaagtgggtga
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