Ricinus communis (castor bean): 8280139
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Entry
8280139 CDS
T01087
Name
(RefSeq) AP-4 complex subunit epsilon
KO
K12400
AP-4 complex subunit epsilon-1
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
8280139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcu04131
]
8280139
Membrane trafficking [BR:
rcu04131
]
Endosome - Golgi transport
Others
AP-4 complex
8280139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
HEAT
HEAT_2
INTS1_R4
Cnd1
HEAT_EZ
TOR1L1_N
PDS5
NPHI_C
Cnd3
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
8280139
NCBI-ProteinID:
XP_002519936
UniProt:
B9S1S1
LinkDB
All DBs
Position
5:27841911..27852089
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AA seq
981 aa
AA seq
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MEQLKTIGRELAMGSQGGFGQSKEFLDLVKSIGEARSKAEEDRIVLSEIETLKKRIVEPD
IPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLLLKRTGYLAVTLFLNEDHDLI
ILIVNTIQKDLKSDNYLVVCAALNAVCKLINEETIPAVLPQVVELLGHSKEAVRKKAIMA
LHRFYHKSPSSVSHLVSNFRKRLCDNDPGVMGATLCPLFDLITVDVNSYKELVVSFVSIL
KQVAERRLPKSYDYHQMPAPFIQIKLLKIMALLGSGDKQASEHMYTVVGDILRKCDSSSN
IGNAVLYESICCVSSIHPNPKLLEAAADVIARFLKSDSHNLKYMGIDALGRLIKLSPDIA
EQHQLAVIDCLEDPDDTLKRKTFELLYKMTKSSNVEVIVDRMIDYMININDSHYKTEIAS
RCVELAEQFAPSNHWFIQTMNRVFEHAGDLVKSKVAHNLMRLIAEGFGEDDDNADSQLRS
SAVESYLHIIGDPKLPSVFLQVICWVLGEYGTADGKFSASYITGKLCDVADAYSNDETVK
AYAVTALMKLYAFEIAAGRKVDILPECQSLIEELSASHSTDLQQRAYELQAVIGLDAHAV
ECILPSDASCEDIEIDDNLSFLDGYVQQSIEKGAQPYIPESERSGVLNISSFRNQDQHEA
SSHGLRFEAYELPKPSAPSRIPAVALAPSRELVPVPEPSYYGEAQQAAIAASSSNTGSSE
VKLRLDGVQKKWGKPTYSSPATSTSSSSSQKTVNGVGPVDGVGNVNSKAPPPSYDSRRPQ
VEISPEKQKLAASLFGGSSKTERRTSSIGHKVARGSSHVPKPAAVSATDVAVERKTTPVQ
PPPDLLDLGESTVKSSDLLVDPFKQLEGLLDQTQLSSSANSGMNSASSAPDIMQLYADTS
ASGQSGNLVSPLSSHKSDDNLVSGSTNAIANPAQSGSTVLSSTQFSKGPNLKDSLEKDAL
VRQMGVTPQSQNPNLFKDLLG
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggagcaactaaagacaataggaagggagctagcgatgggttcacagggcggtttcggt
caatcaaaagagttcctcgatctcgtcaaatcaatcggagaagcacgatctaaagcagaa
gaagatcgaattgtgttaagcgagatcgaaaccctaaagaaacgcattgtggaaccagac
atacctaaacgcaaaatgaaagagtacataatacgcctcgtttatgtcgagatgcttgga
catgacgcctcgttcggttacattcacgccgttaagatgactcacgatgacaatttactt
cttaaacggactggttatcttgctgttacgctgtttctgaatgaagatcatgatttgatt
atattgattgtcaatactatacagaaggatttgaagtctgataattatttagtggtttgt
gcggctctgaatgctgtttgtaagttgatcaatgaggaaaccattcctgctgttttgcct
caggttgttgagttgttaggtcattccaaagaagctgttagaaagaaagctattatggct
cttcatcgcttttaccataagtctccctcgtctgtttctcacctcgtttccaattttcgt
aagaggctttgtgataatgatcctggagtgatgggtgcaacactttgtcctctttttgat
cttataactgtagatgttaattcttacaaagaattggtggttagctttgtaagcattctc
aaacaagtagctgagcgcagattaccaaaaagttatgattatcatcagatgccagcacct
tttatacagatcaagttgctaaaaatcatggcactgctaggaagtggcgacaagcaagca
agtgagcacatgtatactgttgtgggtgacatattgaggaagtgtgattcatcgagtaat
ataggaaatgctgtactttatgagtccatatgctgtgtttcttcaatacatccaaatcct
aagctactagaggctgctgctgatgtgatagctaggttcttgaagagcgacagtcataat
ctaaaatatatgggaattgatgcccttggtcgattgataaagctaagtccagacattgct
gaacaacaccaattggctgtaatagattgcttagaggatccagatgacactctaaagcga
aaaacctttgaactgttatataagatgacgaagtcctccaatgtggaagtgattgttgat
cgcatgattgattacatgatcaatattaacgacagtcattacaaaactgaaatagcatct
cgatgtgtagaacttgctgagcaatttgcacctagcaaccactggtttattcagaccatg
aatagagtctttgagcatgcgggtgatctggtgaaaagtaaggtggctcataacttgatg
cgtttgattgctgaaggatttggggaagatgatgataatgcagacagtcagttgagatca
tctgctgtggagtcatacttgcatattattggagacccaaagcttccatctgtatttctc
caagtcatatgttgggtattgggagaatatggaactgccgatggaaagttttctgcttca
tacatcactgggaagttatgtgatgtggcggatgcatattcaaatgatgaaactgttaag
gcatatgcagttacagcactcatgaaattatatgcatttgaaatagctgctggaaggaaa
gtggatattctacctgagtgtcagtctttgattgaagaattatcagcatcgcactcaaca
gacttgcagcagcgtgcgtatgaacttcaagcagtcattggcttggatgctcatgctgtt
gaatgtattttgccgtcagatgcaagttgtgaagatattgagattgatgataacctctca
ttcctcgatggctatgtccaacagtcaatagaaaagggggctcagccttatattccagag
agtgaacgttctggggtgttaaacattagcagttttaggaaccaagatcagcatgaagct
tcaagtcacggtcttaggtttgaggcttatgagcttccaaagccctcggccccatctagg
atacctgcagtagcacttgcaccctcaagggaactcgttccagttcctgagccatcttat
tatggagaagcccaacaggcagcaatagctgcatcttcatctaacactggatcatcagaa
gtcaagctacggcttgatggagtccaaaagaagtggggtaagccaacttactcctctcct
gcgacatctacctcaagttccagttcccagaaaacagtaaatggagtcggccctgtagat
ggggttggtaatgtaaattcaaaagcacctccaccctcttatgattcgaggaggccacaa
gttgaaatctctccagaaaaacaaaagcttgctgcatcactttttggaggttcatcaaaa
acagagagaaggacatcttcaattggccataaggttgccaggggaagcagccatgttccg
aagcccgcggctgtatctgcaactgatgttgcagtagagaggaaaactactcctgttcaa
ccgcctcctgatttgctcgacctgggtgaatcaactgttaaaagtagcgatctattggtg
gatccatttaagcaattggaagggctgcttgaccaaacccaacttagttcaagtgctaat
tctggcatgaatagtgcttctagtgcacccgatatcatgcagttatatgcagacacatct
gcaagtgggcagagtggcaatcttgtgtctcctttatcatctcataaaagtgatgataat
cttgtatctggatccacaaatgctattgcaaaccctgctcaaagtggaagtacagttctg
agctcgacgcaatttagtaagggcccaaaccttaaagattcattggaaaaggatgcactt
gtgaggcagatgggtgtgaccccacaaagtcaaaatcccaacttattcaaagatttgcta
ggctaa
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