KEGG   Ricinus communis (castor bean): 8280231
Entry
8280231           CDS       T01087                                 
Name
(RefSeq) LOW QUALITY PROTEIN: probable U6 snRNA-associated Sm-like protein LSm4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03018  RNA degradation
rcu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    8280231
  09123 Folding, sorting and degradation
   03018 RNA degradation
    8280231
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rcu03019]
    8280231
   03041 Spliceosome [BR:rcu03041]
    8280231
Messenger RNA biogenesis [BR:rcu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     8280231
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     8280231
Spliceosome [BR:rcu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    8280231
SSDB
Other DBs
NCBI-GeneID: 8280231
NCBI-ProteinID: XP_015570358
UniProt: A0ACL1FI52
LinkDB
Position
10:12510670..12513450
AA seq 136 aa
MNIHPREDGDRFWRMPECYIRGNTIKYLHVPDEVIDKVQGXTKSRSDRKPPGVGCARGRG
GRQPKGIGRVVXDDGVAKGTGGGRGKGVSAGKTVANRGHCSACLLVISIVDEEWNTTELH
SLACEVQDVVVVNQNL
NT seq 411 nt   +upstreamnt  +downstreamnt
atgaacattcatcctcgtgaagatggagatagattttggagaatgcctgaatgttacatc
cgtggaaacacaatcaagtatcttcatgtaccggatgaggtaatcgataaagttcagggg
tagaccaagagccggtcagatagaaagccacctggagtgggctgtgcaaggggaagaggt
ggaaggcagccaaaaggcattgggcgtgtggtantagatgatggagttgccaagggcaca
ggtggtggccggggcaaaggagtatctgcgggcaagactgttgccaatagaggtcattgc
tcggcatgcttacttgtcatttctattgtggatgaggaatggaacacaacagagttgcat
tccttggcatgtgaggtgcaggacgtggtcgtggttaatcaaaatctatag

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