KEGG   Ricinus communis (castor bean): 8280290
Entry
8280290           CDS       T01087                                 
Name
(RefSeq) ubiquitin receptor RAD23b
  KO
K10839  UV excision repair protein RAD23
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03420  Nucleotide excision repair
rcu04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    8280290
  09124 Replication and repair
   03420 Nucleotide excision repair
    8280290
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:rcu03051]
    8280290
   03400 DNA repair and recombination proteins [BR:rcu03400]
    8280290
Proteasome [BR:rcu03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    8280290
DNA repair and recombination proteins [BR:rcu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      8280290
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin UBA_7 Rad60-SLD CUE TECR_N Rad60-SLD_2 UBA_3 Dsc3_N MmeI_C Ubiquitin_4 UBA_RAD5A Ubiquitin_2
Other DBs
NCBI-GeneID: 8280290
NCBI-ProteinID: XP_002512770
LinkDB
Position
8:complement(11727515..11732606)
AA seq 374 aa
MKLTVKTLKGSHFEIRVQPNDTVMAVKKNIEDVQGKDNYPCGQQLLIHNGKVLKDETTLA
DNKVTEDGFLVVMLSKSKTSGSSGTSSTQPAAATPPTTAPSSNSTPAVEVQPPIPKSTTS
ASDTATATTQTDTYGEAASNLVAGDNLEQTIQQIMDMGGGTWDKETVTRALRAAYNNPER
AVDYLYSGIPETAEVAVPVAHLPAGQATETGAAPAAPLSGVPNSSPLNMFPQEALSAAGG
GSAGGLGSLDFLRNNAQFQTLRSMVQANPQILQPMLQELGKQNPQLLRMIQEHHAEFLQL
LNEPLEGSEGDIFDQGEQDMPHAINVTPAEQAAIERLVAMGFDRALVIEAFLACDRNEVL
AANYLLENGGDFED
NT seq 1125 nt   +upstreamnt  +downstreamnt
atgaagctcactgttaagactctcaaaggcagccattttgaaattagggttcagcctaac
gatactgttatggcagtgaagaagaatattgaagatgtgcaaggaaaggataattatcca
tgtggacagcaactattgattcataatgggaaagtattgaaagatgagactacattagct
gataataaggtcactgaagatggttttttagttgtaatgcttagcaagagtaaaacttca
ggttcatctgggacttcatccacccagcctgctgccgcaactccgcctacaactgcacca
tcttcaaattcaactcctgcagttgaagttcaaccaccgatcccgaagagcacaacatct
gcttctgacacagcaacagctactacacaaactgacacctatggtgaagctgcttcgaat
ttagttgctggcgataatcttgagcagactattcaacaaataatggatatgggaggtggc
acctgggataaagaaacagttactcgtgcacttcgagctgcctataataacccagaaaga
gcagtggattacttgtactcaggtattccagaaacagcagaagttgctgtcccggttgct
catttacctgcaggtcaggcaactgaaacaggtgcagctcctgctgcacctttatctgga
gtaccaaattcatctcctttgaatatgtttcctcaggaggcactttctgctgctggtggt
ggtagtgctggtggacttgggtcccttgattttcttagaaacaacgctcagttccaaact
ttgcgatcaatggttcaggcaaatcctcaaattttacagcccatgcttcaggagcttgga
aagcagaacccacagcttttgagaatgatccaagaacatcatgcagaatttcttcagtta
ttaaatgaacctcttgaaggttctgaaggggatatatttgatcagggcgaacaagatatg
ccccatgctattaatgtgactccagctgaacaggcggctattgaacggctagtggcaatg
ggatttgatagagcccttgtcattgaggcatttttggcttgtgatcgcaatgaagtattg
gcagctaattacctattggaaaatgggggagattttgaagattga

DBGET integrated database retrieval system