KEGG   Ricinus communis (castor bean): 8280303
Entry
8280303           CDS       T01087                                 
Name
(RefSeq) protein RAE1
  KO
K14298  mRNA export factor
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    8280303
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rcu03019]
    8280303
   03036 Chromosome and associated proteins [BR:rcu03036]
    8280303
Messenger RNA biogenesis [BR:rcu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     8280303
Chromosome and associated proteins [BR:rcu03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    8280303
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML ANAPC4_WD40 EIF3I Beta-prop_TEP1_C Beta-prop_HPS5 Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_SPT8 NBCH_WD40 Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_WDR75_1st Beta-prop_WDR75_2nd DUF7099 RES
Other DBs
NCBI-GeneID: 8280303
NCBI-ProteinID: XP_002527320
UniProt: B9SMV1
LinkDB
Position
8:complement(11223067..11229159)
AA seq 349 aa
MATFGAAATANQNPNKSIEVSQPPSDSVSSLCFSPKANFLVATSWDNQVRCWEITRNGTT
IGSVPKTQITHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEI
AWIPEMNLLATGSWDKTLKYWDTRQSNPVHTQQLPDRCYAMTVRYPLMVVGTADRNLIVF
NLQQPQTEYKRITSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDDAQQNKNFTFKCH
RDGNDIYSVNALNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCPLPIPCCTFNNDG
SIFAYSVCYDWSKGAENHNPQTAKTYIYLHLPQESEVKGKPRVGTSGRK
NT seq 1050 nt   +upstreamnt  +downstreamnt
atggctacttttggtgctgccgcgactgctaatcaaaaccctaacaaatctattgaggtg
tctcaacctcctagtgactcggtttcgagtctctgtttcagtcccaaggccaatttcttg
gttgctacttcctgggataaccaggtaagatgctgggaaatcacaaggaatggaaccact
ataggaagtgttcccaagacacaaataacacatgaccaaccggttttatgctctgcttgg
aaggatgatggtacgactgtcttttctggaggctgtgacaagcaagtgaagatgtggcct
ttactctctggaggtcaacctgtaactgttgcaatgcatgatgcaccaattaaagagatt
gcatggattccagagatgaacttgctggccacaggaagttgggataagaccttgaagtac
tgggatacaagacagtcaaatccagtgcacactcaacagcttcctgatcgttgttatgca
atgacagtgcgttatcctttgatggttgttggcactgcagatagaaatctcatagtcttc
aaccttcaacaacctcagactgagtacaagagaatcacttctcccttgaagtatcaaaca
agatgtgttgctgcttttcctgatcaacaaggcttcttggttggctcaatcgaggggagg
gttggtgtacatcatctagatgatgcgcaacaaaataagaacttcacttttaaatgccat
agagatggcaatgacatatactcggtcaatgccttgaacttccatccggtgcatcacaca
tttgcaactgcaggatctgatggtgcttttaatttttgggacaaggatagcaaacagagg
ttaaaggccatgtcacgctgtcctcttcccataccctgctgtactttcaacaacgatggc
tcaatttttgcatattcggtgtgctatgactggagcaagggtgcagagaaccacaaccca
caaactgcaaagacctacatctatctgcatttgccacaggagtcagaggttaaaggcaaa
ccacgagttggaacgagcgggagaaagtaa

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