Ricinus communis (castor bean): 8280303
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Entry
8280303 CDS
T01087
Name
(RefSeq) protein RAE1
KO
K14298
mRNA export factor
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
8280303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8280303
03036 Chromosome and associated proteins [BR:
rcu03036
]
8280303
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
8280303
Chromosome and associated proteins [BR:
rcu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
8280303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
ANAPC4_WD40
EIF3I
Beta-prop_TEP1_C
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
NBCH_WD40
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_WDR75_2nd
DUF7099
RES
Motif
Other DBs
NCBI-GeneID:
8280303
NCBI-ProteinID:
XP_002527320
UniProt:
B9SMV1
LinkDB
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Position
8:complement(11223067..11229159)
Genome browser
AA seq
349 aa
AA seq
DB search
MATFGAAATANQNPNKSIEVSQPPSDSVSSLCFSPKANFLVATSWDNQVRCWEITRNGTT
IGSVPKTQITHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEI
AWIPEMNLLATGSWDKTLKYWDTRQSNPVHTQQLPDRCYAMTVRYPLMVVGTADRNLIVF
NLQQPQTEYKRITSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDDAQQNKNFTFKCH
RDGNDIYSVNALNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCPLPIPCCTFNNDG
SIFAYSVCYDWSKGAENHNPQTAKTYIYLHLPQESEVKGKPRVGTSGRK
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggctacttttggtgctgccgcgactgctaatcaaaaccctaacaaatctattgaggtg
tctcaacctcctagtgactcggtttcgagtctctgtttcagtcccaaggccaatttcttg
gttgctacttcctgggataaccaggtaagatgctgggaaatcacaaggaatggaaccact
ataggaagtgttcccaagacacaaataacacatgaccaaccggttttatgctctgcttgg
aaggatgatggtacgactgtcttttctggaggctgtgacaagcaagtgaagatgtggcct
ttactctctggaggtcaacctgtaactgttgcaatgcatgatgcaccaattaaagagatt
gcatggattccagagatgaacttgctggccacaggaagttgggataagaccttgaagtac
tgggatacaagacagtcaaatccagtgcacactcaacagcttcctgatcgttgttatgca
atgacagtgcgttatcctttgatggttgttggcactgcagatagaaatctcatagtcttc
aaccttcaacaacctcagactgagtacaagagaatcacttctcccttgaagtatcaaaca
agatgtgttgctgcttttcctgatcaacaaggcttcttggttggctcaatcgaggggagg
gttggtgtacatcatctagatgatgcgcaacaaaataagaacttcacttttaaatgccat
agagatggcaatgacatatactcggtcaatgccttgaacttccatccggtgcatcacaca
tttgcaactgcaggatctgatggtgcttttaatttttgggacaaggatagcaaacagagg
ttaaaggccatgtcacgctgtcctcttcccataccctgctgtactttcaacaacgatggc
tcaatttttgcatattcggtgtgctatgactggagcaagggtgcagagaaccacaaccca
caaactgcaaagacctacatctatctgcatttgccacaggagtcagaggttaaaggcaaa
ccacgagttggaacgagcgggagaaagtaa
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