Ricinus communis (castor bean): 8280312
Help
Entry
8280312 CDS
T01087
Name
(RefSeq) pleiotropic drug resistance protein 1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
8280312
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rcu02000
]
8280312
Transporters [BR:
rcu02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
8280312
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_29
AAA_16
AAA
AAA_25
AAA_28
RsgA_GTPase
nSTAND3
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
8280312
NCBI-ProteinID:
XP_015579753
UniProt:
A0ACL1FZU6
LinkDB
All DBs
Position
8:complement(11161259..11169182)
Genome browser
AA seq
1438 aa
AA seq
DB search
MDGDIFRASNSLRRGSSSIYRNSGVDVFSRSSREEDDEEALRWAALEKLPTYDRLRKGIL
VSVSKGGANEIDVDNLGFEERKTLLERLVKVAEEDNEKFLLKLKNRLDRVGIEIPTIEVR
FERLNVEAQAFVGTSGLPTFANFSISAIEGILNALHVLPNRKRPLTILKDVNGVIKPRRM
TLLLGPPSSGKTTLLLALAGKLDPNLKFSGNVTYNGHAMNEFIPQRTAAYISQHDLHIGE
MTVKETLAFSARCQGVGTQHEMLAELSRREKAANIKPDPDIDVFMKAAATEGQETSVVTD
YVLKILGLEVCADTLVGNEMIRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTY
QIVNSLRQSIHILNGTAVISLLQPAPETYNLFDDIILISDGQIVYQGPREHVLDFFEYMG
FKCPERKGVADFLQEVTSKKDQQQYWARKEQPYTYVPVKEFAETFQSYDLGRRIGEELST
PYDKTKSHPAALSTKRYGVGKMELFKACFAREYLLMKRNSFVFIFKLCQLLVMAFIGTTV
FLRTEMSKDTVTDGNIYTGALFFSLITVMFNGMSELSMTIAKLPVFYKQRDLLFFPPWAY
SIPSWILKIPITFLEVGVWVFITYYVMGFDPNVERLFRQFFLLLLVNQMASGLFRFIASV
GRNMIIANTFGSFALLTLFALGGFVLSREDIKKWWIWGFWVSPLMYGQNAILVNEFLGHS
WSHLPANSTSNDSLGVQVLSSRGFFTESKWYWLGVIASAGYMVLFNILYTIALTVLGSFE
KPTAVIADDHESSDVTGGAIQLSQVESSRRSNTESGTSRHDEANQSKKKGMVLPFEPHSL
TFDNVIYSVDMPQEMRNQGVLEDKLVLLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAG
RKTGGYIEGNITISGYPKKQETFARISGYCEQNDIHSPHVTVYESLVYSAWLRLPAEVDS
DTRKMFVEEVIDLVELNAQRNSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTS
GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGEEIYVGPLGRH
SCHLINYFEGLEGVSKVTDGYNPATWMLEVTSSAQELTLGVDFANLYRNSDLYRRNKAMI
QELSKPAPGTKDLYFPTQYSQSFLTQCMACLWKQYWSYWRNPPYTAVRFWFTTFIALMFG
TIFWDLGSKTSEPQDLTNAMGSMYAAVLFLGVQNSSSVQPVVAVERTVFYRERAAGMYSA
MPYAYAQALIEVPYIFVQSAAYSIITYAMIGFEWDAAKFLWYLFFLYFTLMYFTFYGMMA
VAFTPNHHIASIVSSAFYSIWNVFAGFIVPRTRLPVWWRWYYWGCPISWTLYGLIASQYG
DVKTLIGSDGQTVEEYVEEFYGMKHDFLGVTAAVIVGITIGFAFIFAVSIKAFNFQRR
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgatattttcagagcaagtaatagcttacgaagagggagttcttcaatatat
agaaacagtggagttgacgttttttcaagatcttcaagagaagaagacgatgaagaagct
ctaagatgggctgcacttgagaagttacctacttatgatcgtttaaggaaaggtatactg
gtcagtgtatcaaagggtggtgctaatgagatcgatgttgacaatcttggatttgaagaa
aggaaaactctgcttgagaggttggtcaaagtcgctgaagaagataatgagaagttcttg
ttgaagctcaagaatcgtcttgatagggtgggaattgagattccaacaattgaagtccga
tttgagcgtctaaatgttgaagcacaggcttttgtaggaaccagcggtttgcctacattc
gctaacttctctattagtgctatagagggtatattgaatgctctacatgtccttccaaac
agaaagagaccattgaccatccttaaggatgtaaatggagtcatcaagccacgaagaatg
actttgcttttgggtcctccaagttctggaaagaccacactcttgttggcgttggctgga
aagcttgatccgaatctaaagttttccggtaatgttacctataatggtcatgcaatgaat
gagtttataccgcagagaacagcagcctatatcagtcaacatgatctccacataggagaa
atgactgtgaaggaaactttggcattttctgccagatgccaaggagttggaacccagcat
gaaatgttagcagagttgtcaagaagagaaaaagcagccaacattaagcctgatcctgat
attgatgtcttcatgaaggcagcagcaacagaaggtcaggagaccagcgtggtcacagat
tacgtcttaaagattctaggattggaggtctgtgcagatactctggtagggaatgaaatg
ataaggggtatctctggagggcaaaagaagcgtgttacaacaggagaaatgctggttgga
cctgcaaaggccttgtttatggatgagatttctactggcctggacagctcaacaacttac
caaattgtgaactcactaaggcagtccattcacattcttaatggaactgctgtcatctcc
ctccttcagcctgcaccggagacttataacctcttcgatgacattattctaatctcggac
ggccagattgtatatcagggtcctcgtgaacatgttcttgacttttttgaatatatgggc
ttcaagtgtcctgaaagaaaaggcgttgctgacttcttgcaagaagtgacatctaagaaa
gatcaacagcagtattgggcacgtaaagaacagccttacacgtatgtcccagtgaaggaa
tttgctgagacttttcaatcatatgacttgggacgaagaattggagaagagctttcaaca
ccatatgataaaaccaagagtcatccagctgctttgtcaaccaaacgctatggtgttgga
aagatggagctctttaaagcatgctttgcaagagaatacttactcatgaaaaggaactca
tttgtgttcatcttcaagctatgccaacttctagtgatggcattcattggtactactgtc
tttctgaggactgagatgagcaaggacactgtcactgatgggaatatctacacaggtgct
ttgttcttctccttgatcacggtcatgtttaatggtatgtcagagttatccatgaccatc
gcaaagcttcctgtgttttacaagcaaagggaccttctattctttcctccatgggcatat
tctattccctcatggatccttaaaattccaattacatttttggaagttggtgtttgggtg
ttcatcacttattatgtcatgggatttgatcctaatgttgaaaggcttttcagacagttc
tttttgctgttacttgttaaccaaatggcgtctggtctcttccgatttatcgcatcagtt
ggaaggaacatgattattgccaatacctttgggtcatttgcactgctcacactttttgca
ttgggcggctttgtcctgtcaagagaggacattaagaaatggtggatatggggtttctgg
gtatcaccactgatgtatgggcaaaatgctatcctagttaatgagtttcttggccacagt
tggagtcatcttccagcaaactcaacctccaatgattcactaggagttcaagttttgagc
agtcgtggtttcttcacagaatcaaaatggtattggttaggagtaattgcatcagctgga
tatatggtcctgttcaacatcctttacaccatagctctcactgtcttgggctcattcgag
aagccaactgctgttatagctgatgatcatgaatcaagtgacgtaactggaggagccatt
cagctatcacaagttgaaagtagtcgtagaagtaatacagagagtggaacaagcagacat
gatgaggcaaaccaaagcaagaaaaagggaatggttcttccatttgaaccacattccctc
acctttgataatgttatatactctgttgacatgccacaggaaatgagaaatcagggagtc
cttgaagataaattggtgcttttgaagggtgtaagtggcgctttcaggcctggtgttttg
accgcattgatgggtgttagtggtgctgggaaaaccactttgatggatgtgttggctggt
agaaaaactggaggatatatagagggtaacatcacaatttctgggtatccaaagaagcaa
gaaacctttgctagaatttcaggatattgtgagcagaacgacatccactctccacatgtt
actgtgtatgaatccttagtctactcagcttggcttcgtctacccgctgaagtcgactct
gacaccagaaaaatgtttgttgaggaggtcattgaccttgtggagctgaatgcacagaga
aattcactagttgggttgcccggtgtgaatggtctttctacagagcagaggaagaggttg
accatagcagttgagttggtggctaacccctcaattatttttatggatgagccaacttca
gggctagatgcaagagctgctgcaattgttatgagaacagtcaggaatactgtggacaca
ggaagaacagttgtctgtaccatccatcagccaagtattgacatattcgaagcttttgat
gagctattcctgatgaagagaggaggagaagagatatacgtcgggccattgggtcgccat
tcttgccatctgattaactactttgagggtcttgaaggagtcagtaaagttacagatggt
tataatccagcaacatggatgttggaagttaccagttctgctcaagaattgactttgggt
gttgattttgctaacctttacaggaattcagacctttacaggagaaacaaggctatgatt
caggaattaagcaagcctgctcctggtacaaaggacctctatttccctacacagtactca
cagtctttcttaacccaatgtatggcttgcttatggaagcaatattggtcatattggagg
aatccgccctacactgcagtcagattttggttcacaacctttattgctttgatgttcgga
acaattttctgggaccttggctccaaaacgagcgagccacaagatcttaccaatgcaatg
ggttcaatgtacgcagctgttctcttccttggggtgcaaaattcatcatctgtgcagcct
gttgttgccgttgaaaggaccgtcttttaccgagagagagctgctggaatgtattctgcg
atgccttatgcatacgctcaggccctgatcgaggttccgtacatttttgttcaatctgct
gcgtacagtattataacatacgcaatgatcggattcgaatgggacgctgccaagttcttg
tggtatttattcttcttgtacttcacattgatgtacttcaccttctacggaatgatggct
gtggcctttaccccaaaccaccacattgcatccatagtctcatcagcattctactcaata
tggaatgtgtttgcaggattcatcgttccgcgaactcggttgcctgtgtggtggagatgg
tactactggggatgccccatctcatggaccctgtacggactgattgcatcacaatacgga
gacgtaaagaccctaattggaagcgatggtcaaacagtcgaagaatatgtggaggagttc
tatggcatgaagcatgattttcttggagtaactgcagctgtaattgttggaatcaccata
ggttttgcatttattttcgctgtttccatcaaggccttcaacttccagaggcggtag
DBGET
integrated database retrieval system
