Ricinus communis (castor bean): 8280336
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Entry
8280336 CDS
T01087
Name
(RefSeq) rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
8280336
Enzymes [BR:
rcu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
8280336
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
8280336
NCBI-ProteinID:
XP_002527353
UniProt:
B9SMY4
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Position
2:4833624..4837961
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AA seq
642 aa
AA seq
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MPLQGVQLNIQDNHVMLDNGILQVTLSNPEGIVTGIQYNGIGNLLEVLNDESNRGYWDLV
WSTPGSTGTTGIFDVIKGTSFKVIVETEEQVELSFTRSWDPSLEGKLIPLNIDKRFVMLR
GSSGFYSYAIFEHLKEWPGFNLAEARIAFKLRKEKFHYMAVADNRQRYMPLPDDRLPPRG
QALAYPEAVLLVNPVESEFKGELDDKYQYSCENKDIRVHGWICMDPSVGFWQITPSNEFR
SGGPVKQNLTSHVGPTTLSVFLSAHYSGEDLVPKFVAGEAWKKVFGPVFMYLNSVLVGDD
PLSLWEDAKEQTEIEVQSWPYFFPASEDYPKSEQRGSVSGRLLVKDRFVSDDYISANGAY
VGLAPQGDVGSWQRECKDYQFWSKADENGYFSINSIRTGDYNLYAWVPGFIGDYRCDVAI
TITSGCDINMHDLVYEPPRDGPTLWEIGIPDRSAAEFYIPDPNPMYINKLYVNHPDRFRQ
YGLWDRYAELYPDGDLVYTVGVSDYRKDWFFAQVNRKKDDNTYQRTTWQIKFKLDNVDKN
GIYKLRVAIASATVAELQVRINDPKANIIFSSGMIGKDNSIARHGIHGLYWLYNVDVPGV
RLVQGGNTVFLTQPRSSSPFQGIMYDYIRLEEPPASAPNKII
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgccactacaaggggtgcaactcaatattcaagataatcatgtgatgttggataatgga
atcctgcaagttacactttcaaatccagaaggaattgtcactggcatacagtataatggc
attggcaacttgcttgaagttcttaatgatgaatctaacagagggtattgggacctggtt
tggagcacaccaggaagcacaggaacaactggaatttttgatgtgatcaaaggaacaagc
tttaaggttatagtggaaactgaagaacaagtggagctctcattcacacgatcatgggat
ccctccttagagggcaagctcattccattaaacatagacaaaaggttcgtgatgcttcgt
ggctcctcaggattctactcatatgcaatctttgagcatttgaaagaatggcctggtttc
aacctggcagaggccagaattgcattcaagcttagaaaagaaaagtttcactacatggca
gtggctgacaatcggcaaagatatatgcccttacctgatgaccgtttgccgccaagaggc
caagccctggcctatcccgaggctgtcttgcttgtcaatcctgtcgagtctgagttcaaa
ggagagttggatgacaagtaccaatattcatgtgagaacaaagacatcagggtacatggt
tggatttgcatggacccatctgtggggttttggcaaatcacacctagcaacgagtttcga
tctggtggacccgtcaaacagaacttgacatctcatgttggccccaccaccctttctgtg
tttctcagtgctcattatagtggggaagatttagtgccaaaatttgtcgctggagaggct
tggaagaaagtatttggtcctgtttttatgtatttgaattctgtcctggttggagatgat
cctctttcactttgggaggatgccaaagaacagacggagattgaagtccaaagctggccc
tatttttttccagcttcggaagattatccaaagtcagaacagagggggagtgtgagcggc
agactacttgtcaaagacaggtttgttagtgatgattatatatcagcaaatggagcttat
gttggattggccccacaaggagatgttggatcatggcaaagggaatgcaaggactatcaa
ttctggagtaaagcagatgagaatggttatttctcaattaacagtatacgtacgggtgat
tataatctttatgcatgggttcctggttttatcggtgattaccggtgcgatgttgccatt
accattacctcaggttgtgatattaatatgcatgatcttgtgtatgagcctccaagagat
ggcccaacattatgggaaataggaattcctgatcgttccgctgcagagttttatattcct
gatccaaatcctatgtacatcaacaaactctatgttaatcatcctgacaggtttaggcaa
tatggactgtgggatagatatgctgaactatatcctgatggagacttagtatatacagtt
ggtgtcagtgactatagaaaagattggttcttcgctcaggttaacaggaaaaaagatgat
aatacgtaccagagaactacatggcaaatcaagttcaaactagacaatgttgataaaaat
ggcatttataaactgcgtgtggcaattgcatcagcaactgttgctgaattgcaggttcga
attaacgatccaaaagcgaatattatattttcgagcggaatgatagggaaggataactca
atcgcaagacatggaatccatggactttactggttgtacaacgtagatgtaccaggcgtt
cgacttgttcaaggaggtaacacagtctttttgacacaaccaagaagcagcagccccttt
caagggattatgtatgactatattcgtttagaagaacctcctgcttctgctccaaataag
ataatataa
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