Ricinus communis (castor bean): 8280339
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Entry
8280339 CDS
T01087
Name
(RefSeq) rhamnogalacturonate lyase isoform X2
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
8280339
Enzymes [BR:
rcu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
8280339
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
Y_Y_Y
CarbopepD_reg_2
AHSA1
Motif
Other DBs
NCBI-GeneID:
8280339
NCBI-ProteinID:
XP_015579796
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Position
2:4844109..4849848
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AA seq
694 aa
AA seq
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MAIADNRRRYMPLPDDRLKDRGKPLAYPEAVLLVNPIKSELKGEVVLDNGFLQITISVPE
GLVTGVQYNGMANLLEVLNHETDRGYWDLVWSDEETIRKKGNFDRMEGTNFTVVVQNEEQ
IEVSFSRHWDSSLKGKLVPMNIDKRFVMLRGSSGFYTYAIYEHLKEWPAFDLDNTRIAFK
LRKDKFNYMAIADNRRRYMPLPDDRLKDRGLPLAYPEAVLLVNPIEPEFKGEVDDKYEYS
CENRESGVHGWISTGSAVGFWLITPSAEFKSGGPLKQFLTSHVGPTILSKFCKGQSSILP
LLDLILLVFHSTHYAGADMIINFGPNEPWKKVYGPVFVYLNSLSTEGDPLSLWEDAKKQM
MKEVESWPYDFPASEDFPPSDQRGNVCGKLLVMDRCVSDENIPADGAYVGLAPVGDVGSW
QIESKGYQFWTEADEDGSFTISNVRPGDYNIYAWVPGFIGDYKNDTVINISNGSSIAVGD
LVYEPPRNGSTLWEIGIPDRSAAEFYVPDPNPNYVNMLYLNHTDRFRQYGLWERYSELYP
DEDLVFTIGTSDYSKDWFFAQVTRKDNSSSNNTYQGTTWQIQFELEEVDQSATYKLRLAL
ATANVAELQVRVNDRNADSSLFSTGKFGKDNTIARHGIHGLYRLFNVDVPGTQLLEGNNT
IFLTQANHVSPFQGIMYDYIRLEGPPFSNTIKKM
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggccatagcagacaatagacgaagatatatgccattgccagacgatagattaaaggac
agaggcaaacctttagcctacccagaggcagtcttgcttgtcaacccaatcaaatctgaa
cttaagggagaggtggtgttggataacgggttccttcagatcactatatccgttccggaa
ggactcgtcaccggcgtacagtacaatggcatggccaatttgcttgaagttcttaaccat
gaaaccgacagagggtattgggatcttgtatggagtgatgaagaaacaattcggaaaaag
ggtaacttcgacaggatggaaggaacaaattttacagtggtagtacaaaatgaggaacaa
atagaagtctcattctcaaggcactgggattcgtcccttaagggaaagcttgttccgatg
aatatagacaaaaggtttgtaatgcttcgtggctcgtcaggcttctacacatatgccatt
tatgagcacttgaaggaatggcctgctttcgaccttgacaacacaaggattgctttcaag
cttagaaaagacaagtttaactacatggccatagcagacaacagacgaagatatatgcca
ttgccagacgatagattaaaggacagaggcctacctctagcctacccagaggcagtcttg
cttgtcaacccaatcgaacctgaatttaagggagaggtagatgacaaatacgagtactca
tgtgagaacagagaaagtggggttcacgggtggatttccactggctcagccgtcggtttc
tggctaattacacccagtgccgagttcaagtccggtggacccttaaagcagtttctcacc
tcccatgtgggtccaaccatcctctctaaattctgcaaaggacaaagttcaatattgccg
ctcttagatcttatccttctggtattccatagcactcattatgctggagcagacatgatt
ataaactttggacccaatgagccatggaagaaagtgtatggccctgtttttgtttatctt
aattctttgtccactgaaggcgacccactttcactttgggaggatgctaaaaaacagatg
atgaaagaagttgaaagctggccgtatgactttcctgcttcagaagattttccaccgtcg
gatcaacgaggtaacgtctgtggcaaattactagttatggataggtgcgtcagcgatgag
aacatacctgcagatggagcttatgtggggctggcacccgtaggagacgtcggttcctgg
caaatcgaatcgaagggttaccagttctggactgaggcagatgaagatggctctttcaca
atcagtaatgtaagacctggtgactacaatatttatgcatgggttccaggttttattgga
gactacaagaatgacactgtcatcaacatatctaatggtagttctattgctgttggtgat
cttgtatatgagcctccaaggaatggctctacactgtgggaaataggtattcctgatcgt
tctgcagcagaattctatgttccagatcccaatccaaattatgtcaacatgctatacctg
aatcatactgacagatttaggcagtatggattatgggaaagatattcagagctgtatcct
gatgaagatttagtctttactattggcactagtgactattcaaaagactggttttttgct
caagttacaaggaaggataatagtagtagtaataacacatatcaaggaactacatggcaa
attcagtttgagctcgaggaagttgatcaaagtgcgacatataaactacgattagcactt
gcaactgcaaatgttgccgaattgcaggttcgggttaatgatcgaaatgcggattcttct
ctattttcaacggggaaatttggcaaggacaacacaattgcgagacatggcattcatggg
ctttacaggttgttcaatgttgatgtaccaggaactcagcttttggaagggaataacaca
atttttttgacacaagcaaaccatgttagcccttttcagggaatcatgtatgattatatt
cgcttagaaggtcctccattttcaaacaccatcaagaagatgtga
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