KEGG   Ricinus communis (castor bean): 8280395
Entry
8280395           CDS       T01087                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 20 homolog 2
  KO
K12195  charged multivesicular body protein 6
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03250  Viral life cycle - HIV-1
rcu04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    8280395
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    8280395
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rcu04131]
    8280395
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rcu04147]
    8280395
Membrane trafficking [BR:rcu04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    8280395
Exosome [BR:rcu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   8280395
  Exosomal proteins of other body fluids (saliva and urine)
   8280395
SSDB
Motif
Pfam: Snf7
Other DBs
NCBI-GeneID: 8280395
NCBI-ProteinID: XP_048228199
LinkDB
Position
3:complement(6151941..6160459)
AA seq 226 aa
MGNLFVKKPKITDVDRAILSLKTQRRKLAQYQQKLEEVIEAEKQAARELILQKRKDRALL
ALKKKKTQEELLKQVDTWLINVEQQLADIELASKQKAVFESLKAGTDTVKAIQSEINLDD
VQKLMDDTEEAKAYQDEINAILGEKLSAEDEEEILAEFENLEAQLTVEDLPEVPTPLPSK
EHEEKLDLPDVPTKPPVAPHAVGDDAETASAELSTNRKVLEEPLPA
NT seq 681 nt   +upstreamnt  +downstreamnt
atggggaatttgtttgtgaagaaaccaaagatcacagatgttgatcgagcaattctctcc
ctcaaaacccaacgccgcaagcttgcacaatatcagcaaaagcttgaagaagttattgaa
gcagaaaagcaagctgctagagagttgattcttcagaagagaaaggatagagccttgcta
gcattaaagaagaagaaaacacaagaagaactgttgaaacaagtggatacatggcttatt
aatgttgagcaacaattggcagatattgaactagccagcaagcagaaagctgtttttgaa
agtttaaaggcaggtactgatacagttaaggcaatacaaagtgagatcaacttggatgat
gtgcaaaagctaatggatgatactgaggaagctaaagcttatcaagatgaaattaatgcc
atcttgggggagaaattatcagcagaagacgaagaagagatcttagctgaattcgagaac
ttagaagctcagctcactgttgaagacttgccagaagttcctactccattgccctctaag
gaacatgaagaaaagttggatcttcctgatgtgccaaccaaaccaccagttgctcctcat
gcagttggagatgatgctgaaactgcatcagctgaactttccacaaataggaaagttttg
gaggaaccattgcctgcatga

DBGET integrated database retrieval system