Ricinus communis (castor bean): 8280564
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Entry
8280564 CDS
T01087
Name
(RefSeq) probable small nuclear ribonucleoprotein F isoform X2
KO
K11098
small nuclear ribonucleoprotein F
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
8280564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8280564
03041 Spliceosome [BR:
rcu03041
]
8280564
03032 DNA replication proteins [BR:
rcu03032
]
8280564
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
8280564
Spliceosome [BR:
rcu03041
]
Complex A
U1 snRNP components
Sm proteins
8280564
U2 snRNP components
8280564
Complex B
U1 snRNP components
8280564
U4/U6.U5 tri-snRNP components
8280564
Complex C
U2 snRNP components
8280564
DNA replication proteins [BR:
rcu03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
8280564
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
8280564
NCBI-ProteinID:
XP_015573609
UniProt:
A0ACL1FQR1
LinkDB
All DBs
Position
5:30051509..30056622
Genome browser
AA seq
88 aa
AA seq
DB search
MATIPVNPKPFLNNLTGKTVIVKLKWGMEYKGFLASVDSYMNLQLGNTEEYIDGQFTGNL
GEILIRCNNVLYLRGVPEDEDIEDADRD
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggcaactataccagttaatcctaagcctttcttgaacaacttgactgggaagactgta
attgtaaaactcaagtggggaatggaatacaaaggttttcttgcttcggtcgattcatac
atgaatctacagcttggtaacactgaagaatatattgatggtcagttcactggaaatctt
ggagagattctgatcagatgcaataatgttctgtatcttcgtggcgtcccagaagatgaa
gacatagaagatgcagaccgtgactga
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