Ricinus communis (castor bean): 8280640
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Entry
8280640 CDS
T01087
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
8280640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8280640
03016 Transfer RNA biogenesis [BR:
rcu03016
]
8280640
03012 Translation factors [BR:
rcu03012
]
8280640
04131 Membrane trafficking [BR:
rcu04131
]
8280640
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rcu04147
]
8280640
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
8280640
Transfer RNA biogenesis [BR:
rcu03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
8280640
Translation factors [BR:
rcu03012
]
Eukaryotic type
Elongation factors
8280640
Membrane trafficking [BR:
rcu04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
8280640
Exosome [BR:
rcu04147
]
Exosomal proteins
Proteins found in most exosomes
8280640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU
GTP_EFTU_D4
Semialdhyde_dhC
Motif
Other DBs
NCBI-GeneID:
8280640
NCBI-ProteinID:
XP_048235159
LinkDB
All DBs
Position
9:complement(5849875..5852408)
Genome browser
AA seq
449 aa
AA seq
DB search
MGKEKIHISIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEIKSVEMHHEALQEALPGDNVGFNV
KNVAVKDLKRGYVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKSVEKKDPSGAKVTKSAAKKGGK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggagaagattcacatcagcatcgtggtcattggacatgtcgactctggcaag
tccaccaccactggacatctcatctacaagctcggaggtattgacaagcgtgtgattgag
aggttcgagaaggaggctgctgagatgaacaagaggtcattcaagtatgcttgggtgctg
gacaagcttaaggctgagcgtgagcgtggtatcaccattgatattgccttgtggaaattc
gaaaccaccaagtactactgtactgtcattgatgctcctgggcatcgtgactttattaag
aacatgattactggtacttcgcaggctgactgtgctgttcttatcattgattccactact
ggtggttttgaagctggtatttctaaggatgggcagacccgtgagcatgctcttcttgct
ttcacccttggtgtcaagcaaatgatttgctgctgcaacaagatggacgccactactccc
aagtactctaaggccaggtacgatgaaattgtcaaggaagtttcatcctatcttaagaag
gtgggatacaaccccgacaaaattcctttcgttcccatctctgggttcgaaggtgacaat
atgattgagaggtccaccaaccttgactggtacaagggtccaaccctacttgaagctctt
gaccagatcaatgagccaaagaggccctcagacaaacctctccgtctcccacttcaagac
gtttacaagattggtggtattggaactgttcctgtgggccgtgtagagactggtgtcctc
aagcctggtatggtggtgacctttggacccagtggattgacaactgaaattaagtcagtt
gagatgcatcacgaggctctccaggaggccctccccggcgacaatgttggatttaacgtg
aagaatgttgctgtgaaagatttgaagagaggttatgttgcatcaaactccaaggatgat
cctgccaaagaagctgccaacttcacatcgcaggttatcatcatgaaccaccctggccag
attggaaatggatatgctccagttttggactgccacacctcccacattgccgtgaagttt
gctgagatcttgaccaagatcgatcgccgatctggcaaggagcttgagaaggagcctaag
ttcttgaagaatggtgatgctgggtttgttaagatgattccaaccaagcccatggttgtc
gagaccttctctgagtaccctccgttgggacgttttgctgtgagggacatgcgtcagact
gttgctgtgggtgttatcaagagcgtcgagaagaaggacccgagtggtgctaaggttacg
aagtctgctgccaagaagggagggaaatga
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