Ricinus communis (castor bean): 8280753
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Entry
8280753 CDS
T01087
Name
(RefSeq) AP-5 complex subunit zeta-1 isoform X1
KO
K19025
AP-5 complex subunit zeta-1
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
8280753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcu03400
]
8280753
DNA repair and recombination proteins [BR:
rcu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
8280753
SSDB
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Paralog
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Motif
Pfam:
SPG48
TPR_AP5Z1_C
Motif
Other DBs
NCBI-GeneID:
8280753
NCBI-ProteinID:
XP_048235334
LinkDB
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Position
9:8430936..8438547
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AA seq
569 aa
AA seq
DB search
MSDRQRGGDWDFHLRTLSISARDSTLAGDPASDPSLLQSVRKLHELCKKENSEDLIARVY
PQINRLFQRSVASLSQSTSAYGLLLLAILQFFLDFGEVVLHDADPSLKTFFRSCLSREFA
DPVVAEATLDFLNVNKKKLSTSFPTLLPQFFPLLLKLIAWNGVKLEKSFLKIFPGMISPG
SFLPLFPSLADLPILVVALEKVERSSGPLIGNSIASIQKSTAPEMLLALMDEAYTGSTIG
DGGADSESEDSITIDVADSTFLEILKDENDGLAERHWTSPGVAATLQAAVNSPQSDRLKQ
TLKIAPQLLDVYFAVATRGVNDSLICALIPLMMSRNDTIFPDKRFSYEARKRLLEFMLAA
FQRSPDFIALLKKPIMDRLGEAYDSPAKTELALQLCWAIGEHGGGGEAHKDAARELFENL
ELLLYENLSSSRLGLRESSMSSNGSNSRKLSQSRLLCFVVTAITKLATYHRELIPRARVS
LGKVARSRISDARVWRRARDYLGLMSEPAICLSVFGPSRPSHGHIQNPGTVNWREGGTKM
TAHIPFYILGEQEGPPFHDFSFSDVLPRR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcggcagagaggaggagactgggatttccatctgcgaaccttatcaataagc
gctagagactccactttagctggcgaccctgcttctgatccttctcttctccaatccgtg
agaaagctacatgaattgtgtaaaaaagagaattcagaggacttaatagcgagagtttat
cctcaaattaacagactctttcaacgctcagttgcttctctttctcaatctacctctgct
tatggacttctcttgctggctattcttcaatttttcctcgattttggagaggtggttctg
catgatgctgatcctagtctgaagacatttttccgctcatgtttgagccgtgaatttgca
gatccagttgttgcagaagcaactcttgattttctgaatgtgaataagaaaaagctctca
acttcttttcccactttattgcctcagttcttccctttgttgctgaagctaattgcatgg
aatggagtaaaattagaaaaatcatttctgaagatttttccaggaatgatatcacctggc
tcatttcttcctctgtttccatctttagcggatttgccaattttggtggtagcgttagag
aaggtagaacgtagctcaggaccacttattggaaacagcatagcatctatccagaagagt
acggctcccgagatgctacttgcactcatggatgaagcttatactggttcgaccattgga
gatggtggggcagactctgagtctgaggatagcatcacaatagatgtggctgattctacg
ttccttgaaattttgaaggatgaaaacgatgggcttgctgaacggcactggacttctcca
ggggtggctgcaactttgcaggctgcagtaaatagccctcagtctgataggctaaagcaa
acactcaaaatagctcctcagcttcttgatgtgtattttgctgtagcaacacgtggtgtt
aatgattctttaatctgtgcattgattcctcttatgatgtccaggaatgacacgatattt
ccagacaaaagattttcgtacgaggctcgtaagaggcttttagagttcatgcttgctgca
tttcaacgatctccagattttatagcccttttaaagaaacctataatggacaggcttggg
gaagcttatgacagccctgcaaagacagaattggctttacagttgtgctgggccattggg
gagcatggtgggggtggtgaggctcacaaagatgctgctcgcgagctttttgagaactta
gagctacttctatatgaaaacctatcatctagtcgtctcggcctaagggagtcaagtatg
agctctaatggttcaaattctagaaagttatcacaatcgaggcttctgtgtttcgttgtt
acagctattacaaagcttgccacatatcaccgcgaattaataccaagagcacgggtatcc
ttaggcaaggtagctcgatctcgaatctctgatgccagggtgtggaggcgtgcccgagat
tatttgggattaatgagtgaaccagctatttgtttatctgtttttggtccttcaagacct
tcacatggacacattcagaatcctggtactgttaactggcgtgaaggaggcacgaagatg
actgcgcacattccattttacattcttggcgaacaagaaggtccaccgttccatgatttt
tccttttctgatgtccttccaagaagatga
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