Ricinus communis (castor bean): 8280886 Help Entry 8280886           CDS       T01087                                  Name (RefSeq) probable RNA helicase SDE3   KO K18422   helicase MOV-10 [EC:5.6.2.5] Organism rcu  Ricinus communis (castor bean) Brite KEGG Orthology (KO) [BR:rcu00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:rcu03019]     8280886    03036 Chromosome and associated proteins [BR:rcu03036]     8280886 Enzymes [BR:rcu01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.5  RNA 5'-3' helicase      8280886 Messenger RNA biogenesis [BR:rcu03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Common to processing body (P body) and stress granule      8280886 Chromosome and associated proteins [BR:rcu03036]  Eukaryotic type   Gene silencing    microRNA pathway     Other miRNA pathway proteins      8280886 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_12 AAA_11 MOV-10_beta-barrel AAA_30 AAA_19 UvrD-helicase ResIII AAA_22 PhoH DEAD Helicase_RecD ATPase_2 AAA_16 Mov-10_helical SLFN-g3_helicase AAA AAA_7 Cep192_D4 NPHP3_N nSTAND3 AAA_24 AAA_5 Motif Other DBs NCBI-GeneID:  8280886 NCBI-ProteinID:  XP_002517101 UniProt:  B9RTN2 LinkDB All DBs Position 9:complement(3288267..3292679) Genome browser AA seq 882 aa AA seqDB search MGTIEGKWDDDEYSVIGDKGEIGFIDYQDDKSVCSYDPIEEGPIFISVPFPFENGKPQSV VLGETASDSITIKNTTDEAVDLWAKIYASNPNNSFTLSLMEPPSANGGNSSRGFLESFNL EDRMLQAGDSLTVWLNCKPQEIGLYTTVVYFDVGSDRIERVVFLLAEDKISRSLASKKPY SRTRRTKQFTVDTYVAGSRPMRKAGWALKNRLPRYDIPMEVRELIESKQTPDAVTGGLTR ENYASYFKTLLIMEEIHMEEDMRSYDMEGVRMRRMGNVLALMVPGLAERRPSLVYGDYIF VKLANVDKTTQPYQGYIHRVEADEVYLKFDPQFHTCHSDGNLYDVHFTYNRVNIRRQYQA VDAAENLEMELLFPSECFGNRLTETAPLVPITCNLNEEQMCSIEMILGCKRAPPYIIYGP PGTGKTMTIVEAILQLYKNRKDTRILVCAPSNSAADHLLEKLLREKAANIRQNEIFRLNA TSRPFGDIKSDYIRFCFFDELLFKCPPLSALRRYRIIISTFMSACYLYAEGVERGHFSHI FLDEAGQASEPESMIPLSNLCGRDTVVVLAGDPKQLGPVIYSRDAGDLGLQKSYLERLFE CECYCNGDENYITKLVRNYRCHPEILKLPSELFYEGELIASKESNDDTISLLSSVNLLPG REFPVLFFGIQGCDEREGNNPSWFNRIEASKVVEIINKLIAGGNLNEVDIGVITPYRQQV LKLKKAFDDLDMPDIKVGSVEQFQGQERKVIVISTVRSTVKHNDFDRAHCLGFLSNPKRF NVAITRAMSLLILIGNPHIVNKDPHWSKLLWYCADHESYQGCGLPEGEEYVEEYQIQDDG ANYDYYNGNPQSTEEHGWNQDYCQAETPKPVTDETEWSDGWK NT seq 2649 nt NT seq  +upstreamnt  +downstreamnt atgggcacgattgaaggcaaatgggatgatgatgagtactcagtaattggagacaaaggt gaaattggatttattgattatcaggatgacaaatctgtgtgtagttatgatccaattgaa gagggtcctattttcatttctgttccattcccctttgaaaatgggaaacctcagtcagtg gttcttggagaaactgcttcagattcaatcactattaagaacaccaccgatgaagccgtt gatttgtgggctaaaatttatgcctccaatcccaataattctttcacactttccttgatg gagcctccatcagcaaatggtgggaacagcagccgaggtttcctagagtcttttaatttg gaagacagaatgcttcaggctggtgactcgttaaccgtttggctaaattgcaaaccacag gaaattggattgtatactacagttgtgtattttgatgtgggaagtgatagaattgaacga gtggtttttctgttggctgaagataagatatctaggtctttggcatcaaaaaagccatat tcaagaactagaagaacgaagcagtttactgtggacacatatgttgcaggttcacgacct atgaggaaggcaggatgggcattgaaaaataggcttcctcgttatgatattcctatggaa gttagagaattgattgagagcaagcagacccctgatgctgtcacaggaggtctaacaaga gagaattatgcttcttattttaaaaccttgttgatcatggaagaaatacacatggaggaa gacatgagatcttatgacatggagggtgtcaggatgaggaggatggggaacgttctggcc ctcatggtcccagggcttgctgagcggagaccttcacttgtctacggagattacatcttt gtcaagcttgcaaacgtggataaaacaacccagccatatcagggctatattcatcgtgtt gaggctgatgaagtgtatttgaaatttgacccacaatttcacacctgccattcagatggg aatctgtatgatgtacacttcacgtataatcgagtcaatataagaagacagtatcaggca gtagatgccgctgaaaatttggaaatggagctcttatttccatccgaatgctttggaaat aggcttactgaaactgcacctctggtgccaataacttgtaaccttaatgaagagcaaatg tgttcaatagagatgatccttggctgcaaaagagctccaccctatataatttatgggcct ccaggtactggtaaaactatgacaatagtggaagcaattctccagctgtataaaaaccga aaggatacacggattcttgtgtgcgcaccctcgaatagtgcagcagatcacttgctagag aagcttctccgtgagaaggctgctaacattcgacagaatgaaatattcagactcaatgca acttcccgaccattcggagatatcaagtctgattatattcgcttttgtttcttcgatgag cttctcttcaaatgtccccccctcagcgctctcagacgctataggatcatcatatcaaca tttatgagtgcttgttatctctatgcagagggtgttgaacgaggtcatttctctcatatt ttcctggatgaggctggccaagcttcagagccagaaagtatgatccctttatccaacctc tgtgggagggatacagttgtcgttcttgctggagaccccaagcagttgggtcctgtaata tactcgagagatgcaggggatctgggattacagaaatcatacttggagaggctttttgaa tgtgaatgttactgcaatggagatgaaaattatataacaaaactggttaggaactaccga tgtcacccagaaattctaaaactgccttcagaactcttctatgaaggggagttgattgcg agcaaagagtctaatgatgataccatttccttgttgtcttcggtaaatctgcttccggga agggaatttcctgtcctcttttttggtatacaagggtgtgatgagagggaaggaaataac ccatcatggttcaaccgaattgaagcaagcaaggtggtggagatcataaacaaactgatt gctgggggaaatctgaatgaggttgatattggggtcattacaccttataggcagcaagtg ctcaaactaaagaaggcctttgatgatttggatatgcctgacataaaagttggcagtgtt gaacaatttcaaggtcaagaaagaaaagtaattgtcatttctactgtcagatcaacagtg aaacacaatgactttgacagagctcattgtttgggttttttgagcaatccaaaaaggttc aatgtggctattacccgtgcaatgtcactgcttatcttaatcgggaatccgcatattgtc aataaggacccacactggagtaagcttttatggtattgtgcagaccacgagtcttatcag ggttgtggtctcccagaaggagaagagtatgttgaagaatatcaaatacaggatgatggt gccaactatgactattataacggaaaccctcagtccactgaagagcatggatggaatcaa gactactgtcaagcagaaactccaaagcctgtcacggatgaaactgaatggtctgatggt tggaagtaa

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