KEGG   Ricinus communis (castor bean): 8281018
Entry
8281018           CDS       T01087                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.3 isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
rcu  Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rcu04812]
    8281018
Cytoskeleton proteins [BR:rcu04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     8281018
SSDB
Motif
Pfam: WD40 Katanin_con80 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_SCAP Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_DCAF4 NBCH_WD40 Beta-prop_EIPR1 Beta-prop_IFT122_1st eIF2A Beta-prop_IFT140_1st Beta-prop_SPT8 WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_IP5PC_F Beta-prop_VPS8 Beta-prop_RIG_1st Beta-prop_WDR19_1st Beta-prop_DCAF12 PROPPIN VPS8_N PAN2_N
Other DBs
NCBI-GeneID: 8281018
NCBI-ProteinID: XP_015571391
LinkDB
Position
8:25617526..25632415
AA seq 807 aa
MTTKRAYKLQEFVAHSSSVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLSGHTS
GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD
FKSHEGQVQCIDFHPHEFLLATGSADRTVKFWDLETFELIGSAGPETTGVRCLTFNPDGR
TLLCGLHENLKVFSWEPLRCHDAVDVGWSRLSDLNVHEGKLLGCSYNQSCVGVWVVDISR
IEPYSPSNVNRLNGYSESKSGISANQSVLLDSTAKTSLGRLSAAQNSEILVKETKSFGRL
SVSQNTDPVKESTKESKILASTGNVPGTPQRVNFNTALKTTLSGPITVNVAAPKRTSTKV
QSAVNVPVLNKADVIPVIVPRTNTRPDPVAEPRKEIGIAGRTMPFSLQSKACDYRKFTNS
RDDMDQPTISIPSDTTSSKSMALSNVGDRNIFSTVKGSIREISTADRNIREDRPVGSGKQ
DSSLIAEPPVSYQEENYETRGHKLNRDATSLEGQKAGRMRSLVINWEKRGRSPNYEGPIS
GSSPETASSVNMLSFNMLKQRGCSPTTEKEMVSASDEDAIADVMEQHDQFVSSMQSRFGK
LQAVHRFWERNDVKGAISAMEKMADHGVLADVISVINEKIDIVTLDVCTCLLPLLAGLLE
SDMDRHLSISLDVLLKLVRTFGSMIYSTVSASTPVGVDIEAEQRLERCNLCFVELEKVKR
CLPTLMRRGGSVAKITQELNLALQDDS
NT seq 2424 nt   +upstreamnt  +downstreamnt
atgactaccaaacgcgcctacaagctccaggaatttgtggcacattcttcaagtgttaat
tgtctcaaaattggaaggaaatcatcgagagtacttgttactggaggagaagatcacaag
gttaatttatgggctattggtaagcccaatgcgatactgagtttgtcaggacatactagc
ggaattgattcagtaagctttgattcttcagaagtcctagtggctgctggggctgcaagt
ggtacaattaagctttgggatttagaggaggcaaagattgttcgtacactgactggtcat
agatctaattgcatatctgtggactttcatccttttggggagttctttgcatctggttct
ctcgacactaatcttaagatatgggatatcagaaaaaagggttgtattcatacatacaag
ggccacactcgaggggtcaatgcaatcagattcacccctgatgggcgctgggttgtatct
ggtggagaggacaatactgtcaagctgtgggatttgactgctggaaagctattgcacgat
ttcaagagtcatgaaggtcaggttcaatgcatagattttcatccacatgaatttcttctg
gcaacaggttctgctgataggactgtcaaattttgggaccttgaaacctttgaactaatt
ggttcagcggggcctgagaccactggagtgcgttgtttgacatttaatcctgatggaagg
actctactttgtggactgcatgagaatctgaaagttttctcttgggaaccattaagatgc
catgatgctgttgatgttggatggtccagattgtcagatctaaatgttcatgaggggaag
cttcttggctgctcgtataaccaaagttgtgttggtgtatgggttgtagacatctcgcgg
attgagccgtattctcctagcaatgtcaatcgactcaatggttattcagaatctaaatca
ggcatcagcgcaaatcagtcagtcttgcttgattccactgccaagaccagtttgggaagg
ttatctgctgcgcaaaactcagaaattttagtaaaggaaacaaaatcttttggaaggttg
tcggtttctcaaaatacagatcctgtcaaggagtcaacaaaggagtccaaaattttggct
tctacgggaaatgtacctggtactccacaaagggtcaacttcaacactgctctgaagaca
actctgtctggtccaataacagttaatgtagcagccccaaagaggacttctacaaaggtc
caatcagcagttaatgttccagtgctcaacaaggcagatgtaatacctgtaattgttcct
agaactaatacaaggccagacccagtggctgaacccagaaaagaaattggtattgctgga
agaacgatgccattttcattgcagtcaaaggcttgtgattaccggaaatttacaaatagc
agagatgacatggaccagccaactatttctatcccttctgatactacgagttcaaagtct
atggcattaagcaatgttggcgataggaatatattttctacagttaaaggctcaattcgt
gaaatatcaactgcagacaggaatattagagaggatagacctgttggatcaggaaaacaa
gattcaagcctgattgctgagccacctgttagctaccaggaagaaaattatgagacacgt
gggcataaattaaacagagatgcaacctctcttgaaggtcaaaaagcgggaagaatgcgg
tcacttgtcataaattgggagaaaaggggaagatctcctaattatgagggacccatttca
ggaagttcccccgagacagcttcttcagtaaacatgctttcttttaatatgcttaaacag
agaggatgctcgccaactactgaaaaagaaatggtttctgctagtgatgaggatgctatt
gcagatgtaatggaacaacatgatcaatttgtcagctccatgcagtctcgttttgggaag
ttacaggctgtgcacagattttgggagagaaacgatgttaagggggccattagtgcaatg
gagaaaatggctgatcatggtgttctcgctgatgtaatcagtgttataaatgagaaaatt
gacattgttacattggatgtatgtacttgtcttctgccacttcttgccggccttcttgaa
agtgacatggataggcatttgagcatctctctggatgtgctacttaagctggtcagaaca
tttggttcaatgatttattcaactgtatctgcatcaactccagttggtgtagacattgaa
gcagagcaaagattggaacgctgcaatctctgctttgtagaactagaaaaagtcaagcga
tgcctgccgaccctcatgagaagagggggctctgttgcaaaaatcacccaggagctgaat
ttagctcttcaagacgattcatga

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