Ricinus communis (castor bean): 8281292
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Entry
8281292 CDS
T01087
Name
(RefSeq) SEC12-like protein 1
KO
K14003
prolactin regulatory element-binding protein
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
8281292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcu04131
]
8281292
Membrane trafficking [BR:
rcu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
8281292
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
EIF3I
WDR55
WD40_CDC20-Fz
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
8281292
NCBI-ProteinID:
XP_048231971
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Position
6:24489508..24494525
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AA seq
389 aa
AA seq
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MEQRGRGIVTCGSWIRRSDNVNLVVLGKSRTSNSSSSVLDIFSFDPITTSLAPSPLASYV
LEETEGDVVAIAVHPSGDDFICSTTKGGCKLFELHGQETNLKLLAKELPPLQDVGTQKCL
VFSVDGSRFASGGVDGHLRILEWPSQRIIADERRAHKSFRDMDISLDSAFLASTSTDGSA
RIWNVEDGAPLTTVTRNSDEKIELCRFSKDGTKPFLFCAVQRGDKATTAVYDISTWKKIG
YKRLLKKPACIMSVSLDGKYLALGSKDGDICVAEVKKMEVSHWSRRLHLGTCITSLEFCP
SQRVVLTTSDEWGAVVSKLNVPADWKEWQIYLLLVGLFLASAVAFYIFFENSDSFWNFPL
GRNQPARPKFGSVLQDPQSSDDVFGPLDM
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcgtgggcgtggaatagttacatgtgggtcatggatccggagatccgacaac
gttaatttggttgtgttgggcaagtcgaggacctccaattcatcttcttctgtgcttgac
atcttctcgtttgatccaattactacgtctctcgctccctctcctttggcaagttatgta
ctagaagaaactgaaggtgatgtagtagcaattgcagtgcatccaagtggagatgatttt
atatgttccacaactaaaggtggttgcaaattatttgagttgcatggccaagaaacaaac
ttaaagttgttggctaaagaattacctcctttacaagatgttggtacgcagaaatgccta
gtctttagtgttgatggatctagatttgcctctggaggagtggacggacatctcagaatt
ttggagtggccaagccaacgcataattgcagatgaaagaagagcacacaagtccttccgg
gatatggatattagtctagattcagcatttttagcttcgacatctacggatggttctgca
agaatatggaatgtagaagatggtgcgcctttgactactgtgacgcgcaactcggatgaa
aagattgaattatgtcgattctctaaagatggaactaaaccatttttgttttgtgctgtt
cagagaggtgataaagctaccactgctgtttatgacataagtacgtggaagaaaattggg
tataagaggctgcttaagaaacctgcttgtataatgtctgtcagcctggatgggaaatat
cttgctctaggaagcaaggatggtgacatctgtgtagctgaagtaaagaaaatggaagtt
agccattggagcaggaggctgcaccttggtacatgcattacatctttagaattctgtccc
agtcagagggttgtactcactacatctgatgaatggggggcagtagtcagtaagctaaat
gttcctgcagattggaaagaatggcagatttatttgctgcttgtagggctatttttggca
tctgctgttgcattttacattttctttgagaattctgattcattttggaacttccctttg
gggagaaatcaacctgcaagaccgaagttcggttcagttttgcaagacccacagtcctcc
gatgatgtatttgggcctttagatatgtga
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