KEGG   Ricinus communis (castor bean): 8281292
Entry
8281292           CDS       T01087                                 
Name
(RefSeq) SEC12-like protein 1
  KO
K14003  prolactin regulatory element-binding protein
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    8281292
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rcu04131]
    8281292
Membrane trafficking [BR:rcu04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    8281292
SSDB
Motif
Pfam: WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40 EIF3I WDR55 WD40_CDC20-Fz Beta-prop_Vps41 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st
Other DBs
NCBI-GeneID: 8281292
NCBI-ProteinID: XP_048231971
LinkDB
Position
6:24489508..24494525
AA seq 389 aa
MEQRGRGIVTCGSWIRRSDNVNLVVLGKSRTSNSSSSVLDIFSFDPITTSLAPSPLASYV
LEETEGDVVAIAVHPSGDDFICSTTKGGCKLFELHGQETNLKLLAKELPPLQDVGTQKCL
VFSVDGSRFASGGVDGHLRILEWPSQRIIADERRAHKSFRDMDISLDSAFLASTSTDGSA
RIWNVEDGAPLTTVTRNSDEKIELCRFSKDGTKPFLFCAVQRGDKATTAVYDISTWKKIG
YKRLLKKPACIMSVSLDGKYLALGSKDGDICVAEVKKMEVSHWSRRLHLGTCITSLEFCP
SQRVVLTTSDEWGAVVSKLNVPADWKEWQIYLLLVGLFLASAVAFYIFFENSDSFWNFPL
GRNQPARPKFGSVLQDPQSSDDVFGPLDM
NT seq 1170 nt   +upstreamnt  +downstreamnt
atggagcagcgtgggcgtggaatagttacatgtgggtcatggatccggagatccgacaac
gttaatttggttgtgttgggcaagtcgaggacctccaattcatcttcttctgtgcttgac
atcttctcgtttgatccaattactacgtctctcgctccctctcctttggcaagttatgta
ctagaagaaactgaaggtgatgtagtagcaattgcagtgcatccaagtggagatgatttt
atatgttccacaactaaaggtggttgcaaattatttgagttgcatggccaagaaacaaac
ttaaagttgttggctaaagaattacctcctttacaagatgttggtacgcagaaatgccta
gtctttagtgttgatggatctagatttgcctctggaggagtggacggacatctcagaatt
ttggagtggccaagccaacgcataattgcagatgaaagaagagcacacaagtccttccgg
gatatggatattagtctagattcagcatttttagcttcgacatctacggatggttctgca
agaatatggaatgtagaagatggtgcgcctttgactactgtgacgcgcaactcggatgaa
aagattgaattatgtcgattctctaaagatggaactaaaccatttttgttttgtgctgtt
cagagaggtgataaagctaccactgctgtttatgacataagtacgtggaagaaaattggg
tataagaggctgcttaagaaacctgcttgtataatgtctgtcagcctggatgggaaatat
cttgctctaggaagcaaggatggtgacatctgtgtagctgaagtaaagaaaatggaagtt
agccattggagcaggaggctgcaccttggtacatgcattacatctttagaattctgtccc
agtcagagggttgtactcactacatctgatgaatggggggcagtagtcagtaagctaaat
gttcctgcagattggaaagaatggcagatttatttgctgcttgtagggctatttttggca
tctgctgttgcattttacattttctttgagaattctgattcattttggaacttccctttg
gggagaaatcaacctgcaagaccgaagttcggttcagttttgcaagacccacagtcctcc
gatgatgtatttgggcctttagatatgtga

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