Ricinus communis (castor bean): 8281374
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Entry
8281374 CDS
T01087
Name
(RefSeq) DNA mismatch repair protein MLH1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03430
Mismatch repair
rcu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
8281374
03460 Fanconi anemia pathway
8281374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcu03400
]
8281374
DNA repair and recombination proteins [BR:
rcu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
8281374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
DUF7694
Motif
Other DBs
NCBI-GeneID:
8281374
NCBI-ProteinID:
XP_015576417
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Position
2:complement(10613941..10625221)
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AA seq
728 aa
AA seq
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MEIEESPSSPLSSVPITKEPPKIHRLEESVVNRIAAGEVIQRPVSAVKELVENSLDAHST
SINVVVKDGGLKLIQVSDDGHGIRYEDLPILCERHTTSKLSTYEDLQSIKSMGFRGEALA
SMTYVAHVTVTTITEGQLHGYRVSYRDGVMEHEPKACAAVKGTQIMVENLFYNMIARRKT
LQNSADDYSKVVDLLSRFSIHHTNVSFSCRKHGAARADIHSVATSSRLDSIRTVYGASAA
RNLMKIEASDEASNFDMNGFISNSNYVAKKTTMVLFINDRLVECTTLKRALEIVYTATLP
KASKPFVYMSVVLPPEHVDVNVHPTKREVSLLNQETIVEKIQLAVESKLRSSNEAKSFQE
QTIDPSPSCPLGTGKDLKVDPSSNGSKAQKVPVNKMIRTDVLDPAGRLHAYFEAKPSALS
AVRSSVRQRRNPKETADLTSIQELIDDIDCHCHSGLLDIVRQCTYIGMADDSFALLQYNT
QLYLANVVKLSKELMYQQALRRFAHFNAMQLTNPAPVPELIMLALKEDELDPDASENDDL
KEKIAELNTELLKEKAEMLDEYLSIYIDSHGNLSRLPVVLDQYTPDMDRIPEFLLCLGND
VDWEDEKNCFQAIAAALGNFYAMHPPLLPNPSGDGLEFYKRKRSPKNSEVEEVTTVTVLT
GDVSVEDEIEHELLSEAETAWAQREWSIQHVLFPSMRLFLKPQTSMATDGTFIQVASLEK
LYRIFERC
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaaatagaagaatcaccatcgtcgccattatcatcagttccgattacaaaagagcca
ccaaagattcaccggctggaagagtcagtggtgaatcgaatagctgccggagaggttata
caacggcctgtatcggctgtgaaagagctggtggagaatagtctagatgctcactctact
tccattaatgttgtcgttaaagatggtggccttaagcttattcaggtctccgatgacgga
catggtattcgatatgaggatttgcctatactatgcgagagacacacgacgtcaaaactg
tctacttatgaggatttgcagtcaataaagtcgatggggtttagaggagaggcgttggct
agtatgacttatgtagctcatgttacggttactacaatcactgaaggtcagttgcatggc
tacagggtgtcttatagagatggtgtcatggagcatgaaccaaaggcctgtgctgctgtc
aaagggactcagattatggtagagaatttgttctataacatgattgctcggaggaagacg
ctccagaattctgctgatgattattctaaagttgtagacttgctaagtcgcttttccatt
catcacacaaacgtgagcttttcatgcagaaagcatggagctgcaagagcagatatccac
tcagtagcaacatcgtcaaggctggactccatcagaacagtttatggggcctcagctgct
cgcaacctaatgaagatagaagcctcagatgaagcttcaaattttgacatgaatggattt
atctcaaactccaattatgttgcaaagaaaacaacaatggtgctttttattaatgataga
ctggtggaatgcactactttgaagagagctcttgaaattgtttatactgctaccttaccc
aaagcttcaaaaccttttgtgtatatgtcagtcgtgttgccacctgagcatgttgatgtg
aatgtgcatccaacaaagagagaggtaagcctcctgaaccaagaaactattgttgagaag
atacaattggctgttgaatcaaaattgaggagctcaaatgaggccaagtcatttcaggaa
cagactatcgatccttctccaagttgtcctttgggtacaggcaaggacttgaaggttgat
ccctcatccaatggttcaaaagcacaaaaggttcctgtgaataagatgataagaactgat
gtattggatccggccggaaggctgcatgcctactttgaggccaaaccttctgccttgagt
gctgtgaggtcttcggttaggcaaagaaggaacccaaaggaaactgcagatcttacgagc
atccaggagcttattgatgatattgattgccattgtcattctggtctgttggacattgta
cggcagtgcacttatattggaatggcagatgatagttttgcattgcttcagtataatact
caactgtatctcgcaaatgtagtgaaattgagcaaagagcttatgtatcaacaagcttta
cgccggtttgcacattttaatgctatgcaactaactaatccagcccctgtgccagaactc
attatgttggccttgaaagaggacgaattggacccagatgcgagtgaaaacgatgacttg
aaagagaagattgcagaactgaacactgaattgctcaaggaaaaggctgaaatgctggat
gaatatttgagcatttatattgactcgcatggaaatttgtctaggcttcctgtggtactt
gaccagtacacacctgacatggaccggattcctgaatttctactttgtttgggcaatgac
gttgattgggaggatgagaagaactgctttcaagcaatagcagctgctcttggaaacttt
tatgctatgcatcctcctctattgcccaatccatcaggtgatggtttggaattttacaaa
aggaaaagatctccaaagaattcagaagttgaagaagtcaccaccgttacagtgctcaca
ggtgatgtttcagttgaggatgaaattgagcatgaactcctctctgaggctgagactgca
tgggctcaacgtgaatggtcaattcagcatgtcttgtttccttctatgagactcttttta
aagccacaaacttcaatggctacagatggaacatttattcaggtagcttcactggagaag
ctgtataggattttcgagagatgctaa
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