Ricinus communis (castor bean): 8281417
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Entry
8281417 CDS
T01087
Name
(RefSeq) cleavage stimulating factor 64
KO
K14407
cleavage stimulation factor subunit 2
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
8281417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8281417
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
8281417
U7-dependent histone pre-mRNA processing factors
8281417
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GFIT
Motif
Pfam:
RRM_1
CSTF2_hinge
RRM_7
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
8281417
NCBI-ProteinID:
XP_015579610
UniProt:
A0ACL1G1A2
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Position
2:9277836..9284638
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AA seq
555 aa
AA seq
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MASSSQQRCVFVGNIPYDATEEQLIDICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEE
TALSARRNLQGYEINGRQLRVDFAENDKNADRNREQGRGGPGLANIDPQKQIGGPAILGE
SAQHQPIGLHIAITAATVMAGALGGVQTGMQSNLNGLQSQSALASDPLTLHLAKMSRSQL
NDIMSELKVMATQNKESARHLLLTKPQLPKALFQAQIMLGMVTPQVLQMPNIRQPPGQPA
VRPLEDSQQGQRPAIQNVPGLPPFSQRIQSSLVPKLQEGQFSSVSQNSLVQNQFSVPPQL
VQPRTQIQQHSNSHIPQQAILSGQSGVPPIPHVHPSVRPQIQVANSSSLNQQTPPSLLQQ
PGKQVRTANFGRASHIVLPNVAMESSIFPRPLQPDAAFQPGPPILSGISDSVGRGADRST
QVPDDTAQVHRNNAYFKMQTNMVNDSKEPINRPSKMLKLDDGRSMSFSSSALNVSKSGPT
QSHAISSVPANSLPKPEELQTSEKQVSQLPADVESALLQQVLNLTPDQLNLLPPEQRQQV
IQLQQALRQDQTQPS
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatcttctcagcaacgctgcgtttttgttgggaatataccgtacgatgctact
gaggaacagcttattgatatctgtagagaggttggtcctgttgtctctttcaggttagtt
attgatagagagacagggaaaccaaaaggttatggattctgtgaatataaggacgaagag
acagcattaagcgctcgtcgtaatctccagggttatgagatcaatggcaggcaattacga
gttgattttgctgagaatgacaaaaatgctgacagaaatcgtgagcagggtcgtggggga
cctggactagctaatattgaccctcagaaacaaataggaggcccagcaatcctcggggaa
tctgctcaacatcagcctattggtctacacatagctataactgctgcaactgtcatggca
ggagctttaggtggtgttcagactggcatgcagtcaaatctaaatggtttacagagtcag
tcagcattagctagtgaccccttaactcttcatttggccaaaatgtctaggagtcaattg
aatgatatcatgtctgagctgaaggtgatggcaacacagaacaaggaatcagctcgtcat
ctactgcttacgaaaccacagttgccaaaagctctttttcaggcgcagataatgctagga
atggtgaccccacaagtgttgcagatgccaaatattcggcaacctccaggtcaacctgca
gtccgtcccttagaagattctcagcagggccagcggccagcaatccaaaatgttccagga
ttaccccccttttcacagaggattcagtctagcttggtgcctaaattgcaagaaggtcaa
ttctcttctgtctctcaaaattctttggtgcaaaaccaattttctgtacccccacaatta
gtccagcctcgaacacagattcagcaacactctaatagccacattcctcaacaagccata
ttatcaggccaatctggagttccgcccatcccccatgtacacccttctgttagaccacaa
attcaggtggccaattcctcgtctttgaaccaacagacacccccttcactgctacaacag
ccaggaaaacaggttagaactgcaaattttggacgtgcctctcatatagttctaccaaat
gtagcaatggaatcatctatttttcctcgtcctctccagccggatgccgcattccagcct
ggacccccaatattatcaggcatttcggattcggttggccgtggtgctgatagatctacc
caagttccagatgacacagctcaggtccacagaaataatgcatatttcaaaatgcaaaca
aacatggttaatgattctaaagaacccatcaatcgcccttcaaagatgctaaaattggat
gacggaaggagcatgtctttctcatcaagtgctttgaatgtgtctaaatctgggccaacc
caatcacatgcaattagttcagtgccagcaaattcacttcctaagccagaagagttgcaa
acttctgaaaaacaggtttctcagcttccagcagatgtggaatctgcattattgcagcaa
gtcttgaacctcaccccagatcagttgaatttattgccaccagaacagcggcaacaagtc
attcagcttcaacaagcgcttcgacaagatcagacacagccgtcataa
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