Ricinus communis (castor bean): 8281647
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Entry
8281647 CDS
T01087
Name
(RefSeq) cryptochrome-1 isoform X1
KO
K12118
cryptochrome 1
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
8281647
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Motif
Pfam:
FAD_binding_7
Cryptochrome_C
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
8281647
NCBI-ProteinID:
XP_048226909
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Position
2:complement(5871181..5875964)
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AA seq
677 aa
AA seq
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MSGGGCSIVWFRRDLRVEDNPALAAGVRAGAVVAVFVWAPEEEGHYYPGRVSRWWLKQSL
AHLDSSLRSLGTVLVTKRSTDSVSSLLEVVKSTGATQLFFNHLYDPISLVRDHRAKEVLT
AQGIAVRSFNADLLYEPWEVNDVQGRPFSTFAAFWERCLSMPYDPEAPLLPPKRIISGDI
SRCPSDTLIFEDESEKGSNALLARAWSPGWSNANKALTTFINGPLIEYSKNRRKADSATT
SFLSPHLHFGEVSVRKVLHLVRIKQVLWANEGNKAGEESVNLFLKSIGLREYSRYLSFNH
PYSHERPLLGHLKFFPWIVNEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQFEGYKFD
PHGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGIDAAKVRLQEA
LSEMWQHEAASRAAIENGTEEGLGDSSESAPIAFPQDIQMEENLEPIRNNPPIPIRRYED
QMVPSMTSSLLRVEEEETSSDLRNAAEDSRAEVPRDVNVNQEQRRNLGVAQAFRSNNLPN
VNILRGLPNTEDSTAESSSSTRRERDGGIVPVWSPPSTSYSEQFAGDENGIGTSSSYLQR
HPQSHQIINWRRLSQTG
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtggtggttgtagcatagtttggttcaggagagatctaagagtagaagataat
ccagcacttgcagctggtgttagagctggggctgttgttgccgtctttgtatgggctcct
gaggaagaaggtcattattaccctggtagagtatctaggtggtggcttaagcaaagtttg
gctcatttggattcttctttgagaagtcttggcactgttcttgttactaaaagatcaact
gatagtgtttcttcccttcttgaagttgttaaatctactggtgctactcaactcttcttc
aaccacttgtatgatccaatttcactggttagggatcatcgggcaaaggaggttttgact
gcacaaggcatagctgtaagatcttttaacgcggatttgctatatgaaccctgggaagtt
aatgatgtccaaggacgccccttctctacctttgctgctttttgggaaagatgccttagc
atgccttatgatccagaggctccacttctcccacctaagagaattatttcaggtgatata
tctagatgcccttcagacacactgatatttgaagatgaatcagaaaagggaagcaatgca
ctgcttgctcgagcatggtcacctgggtggagcaatgctaataaagcgctaactacattc
atcaatgggccacttattgagtactcaaagaatcgtagaaaggctgatagtgctacaacc
tcctttctttctcctcatttgcattttggtgaggttagtgtgagaaaggtcttacatctt
gttcgcattaagcaagttctgtgggcaaatgaagggaacaaggctggtgaagaaagtgtg
aacttgtttcttaaatcaattggtcttagggaatattcaagatacctgagttttaaccat
ccttatagtcatgaacgccctcttcttgggcatcttaagttttttccttggattgtgaat
gaaggctattttaaggcttggagacaaggtagaactggttatccattggttgatgcagga
atgagagagttgtgggccactggttggctgcatgatcgaatacgagtagttgtttctagt
ttctttgtaaaggttctacagcttccatggagatggggaatgaagtatttctgggatacc
ctcttggatgcagatttagagagtgatgctcttggttggcagtacatatctggtactctt
cctgatggccgagagtttgatcgtatagacaacccacagtttgagggatacaaatttgat
ccccatggagaatatgtacgacggtggcttcctgaacttgccaggctgccaactgaatgg
atacatcatccatggaatgcacctgaatctgtactccaagctgctggaattgagctagga
tcaaattaccctctccccattgtagggatagatgcagctaaagtcaggttgcaagaagca
ctttcagaaatgtggcagcacgaagccgcttccagagctgctattgagaatgggactgaa
gaaggtctaggagactcttctgaatcagctccaattgccttccctcaagatatacaaatg
gaagaaaaccttgaacctataagaaacaatcctcctattccaattcgccgttatgaggat
cagatggttccaagcatgacttcttctttgctaagagttgaagaagaagaaacttcgtca
gatcttcgaaatgctgcagaagatagcagagctgaggtgccaagagatgtaaatgtcaat
caagaacaaagaagaaaccttggggttgcacaagcttttcgtagtaacaacttaccaaat
gttaatattctcagaggtctgccaaatactgaggattcaacagcagaatcttcgagtagt
actaggagagagagggatggaggtatagttccagtgtggtctcctccaagcactagttac
tcagagcagtttgctggtgatgaaaacggtattggaaccagttcttcttacttgcaaagg
catccgcaatctcaccagataattaattggaggcggctgtctcagactgggtaa
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