KEGG   Ricinus communis (castor bean): 8281758
Entry
8281758           CDS       T01087                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog 1
  KO
K12184  ESCRT-I complex subunit VPS28
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    8281758
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rcu04131]
    8281758
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rcu04147]
    8281758
Membrane trafficking [BR:rcu04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    8281758
Exosome [BR:rcu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   8281758
  Exosomal proteins of other body fluids (saliva and urine)
   8281758
  Exosomal proteins of colorectal cancer cells
   8281758
  Exosomal proteins of bladder cancer cells
   8281758
SSDB
Motif
Pfam: VPS28 GDH_C
Other DBs
NCBI-GeneID: 8281758
NCBI-ProteinID: XP_002521434
UniProt: B9S615
LinkDB
Position
5:13249017..13251069
AA seq 209 aa
MEVKLWNDKREREMYENFAELYAIIKATEKLEKAYIRDIISSSDYETECQKLIAHFKTLA
STLKDIVPSIERFADTYKMDCPAAINRLVTSGVPATVEHRAAAASSATTSAAIVAECVQN
FITAMDSLKLNMVAVDQVYPLLSDLSASLNKLSILPPDFEGKLKMKDWITRLSKMGASDE
LTEQQARQLHFDLESSYNSFMAVLPSAGT
NT seq 630 nt   +upstreamnt  +downstreamnt
atggaggtcaaactatggaatgacaagcgcgaaagagaaatgtatgagaattttgctgag
ctctatgccataattaaagccacagagaagcttgaaaaggcctacattcgtgacataatc
tcttcatctgactatgaaactgagtgccagaaacttattgctcatttcaaaaccctagcc
tccacattgaaagacatagttcctagcattgagcgctttgccgacacatacaagatggat
tgtccagctgccataaaccgtttggtgacctctggggtgcctgcgacagtggaacaccgg
gctgctgcagcttcctcagctactacctctgctgctattgtggcagagtgtgtgcagaac
tttattacagctatggattccttgaaattgaatatggtggcagtggatcaagtgtaccct
ttgctctcagacctttcagcttcacttaataaattgagcatcttgccaccagattttgag
gggaaattaaagatgaaagactggattactaggctgtctaagatgggggcttcggatgag
ttaacagagcagcaggctcggcagctacactttgatctcgaatcctcctataattctttt
atggcagttttgcctagtgctggcacttga

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