KEGG   Ricinus communis (castor bean): 8281785
Entry
8281785           CDS       T01087                                 
Name
(RefSeq) denticleless protein homolog
  KO
K11790  denticleless
Organism
rcu  Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rcu04121]
    8281785
Ubiquitin system [BR:rcu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     8281785
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_EML EIF3I Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_DCAF12 ANAPC4_WD40 Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st MIOS_WD40 Beta-prop_WDR11_1st Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_HPS5 WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_WDR75_2nd Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_Nup120_160 Peptidase_C9 Ge1_WD40 Beta-prop_IFT122_2nd
Other DBs
NCBI-GeneID: 8281785
NCBI-ProteinID: XP_002521461
UniProt: B9S642
LinkDB
Position
5:complement(13449505..13453976)
AA seq 502 aa
MDSFFQGIRSRELNGFKVKKRPYVGDKATDFTELGALAVEHDGEETPPLAISFCETNKNS
HILAVSDEDGYLSLFDSRKKFPSYASHQECSDTARISDWVAHQNAIFDICWIKEDTNILT
ASGDQTIKIWDAQEKKCIGVLMGHTGSIKSMCSHPTNSDILVSGSRDGSFATWDLRCNTT
SKSEITCITPTSMVKRAHLSPYAKRVRRGKAASMSITSVLYLKDEVSITTAGAVDSIIKF
WDARNLKTHVTQACPHPKSADKDRRLHGISSLSQDSNGVFLTASCMDNRIYLYNALQLEK
GPVQSFSGCRIESFYVKSAISPDATQILSGSTDGNAYIWQVNKPEADPITLKSHDGEVTA
VDWCPYDGKIATSSDDFTVRIWNIQSNNYSSSRSPSSIRRRIMAIPSEECRRLLMNEEPL
SLTKTSNHLNSSDELLQVDLPNSIRMPTLSTPEAHKRKFSSGSDSKGTFDKTPEAAMKSP
SSVLNPPSSLKRKTIRDYFLAA
NT seq 1509 nt   +upstreamnt  +downstreamnt
atggactccttctttcaaggcatcagatccagagaactcaacggattcaaagttaaaaag
cgaccatatgtaggagacaaagccacagattttacagaacttggagccctagcggttgaa
cacgacggcgaagaaacgccccctttagccatttctttttgcgagacaaataaaaattcg
catattttggctgtgtctgatgaggatgggtatttgagcttgtttgattctcgcaagaag
ttcccttcttatgcctctcatcaagagtgttcagatacagctagaattagtgactgggtg
gctcatcagaatgctatatttgatatatgttggattaaggaagatactaatatactcaca
gcttcaggagatcaaactataaagatatgggacgcacaggagaagaaatgcattggagtc
ttgatggggcacacaggaagtattaaatctatgtgttcccatccaacaaattctgatatt
cttgtttctggttctagagatgggtcctttgccacatgggacttgagatgcaacactact
tccaaaagtgagataacttgcataactccaacgtccatggtgaaaagagctcatctttca
ccttatgcgaagcgggttaggcggggaaaggctgcttccatgagcatcacatcagttctt
tatctcaaagatgaggtctccattaccactgctggagcagtggacagcattataaaattc
tgggatgccagaaacttaaagactcacgtgactcaggcgtgccctcatcctaaatcagcc
gataaggacagaagattgcacggtatatctagcctatctcaggattcaaatggagtcttt
cttactgcttcatgcatggacaatagaatctatttgtataacgcacttcagcttgaaaag
ggtcccgtgcagtcattctctggatgccggattgaatccttctatgtaaagtcagcaatc
agtcctgatgcaactcaaattctcagtggatctactgatggaaatgcctacatatggcag
gtgaacaagcctgaggcagatcccatcacattgaaaagccatgatggagaagttacagca
gtagattggtgcccctatgatgggaagatagccacttcttcagatgacttcactgtccgc
atttggaacatccaaagcaataattattctagctcaagatccccatcttctattcgaagg
agaataatggcaattcctagtgaggaatgtagaaggcttttaatgaatgaagaaccgttg
agtcttacaaaaacttccaatcatttgaattcttcagatgaattactccaggttgactta
ccgaactctatcagaatgcctactctaagcacccctgaagcccacaagagaaagttctcc
tcaggttctgattcaaaaggaacttttgacaaaacacctgaagcagcaatgaagagcccg
tcttctgttttgaatcccccatcttctttgaaaagaaagactatccgggattactttcta
gcagcctaa

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