Ricinus communis (castor bean): 8281853
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Entry
8281853 CDS
T01087
Name
(RefSeq) ARF guanine-nucleotide exchange factor GNOM
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
8281853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcu04131
]
8281853
Membrane trafficking [BR:
rcu04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
8281853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
TPR_28
Motif
Other DBs
NCBI-GeneID:
8281853
NCBI-ProteinID:
XP_002522485
UniProt:
B9S916
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All DBs
Position
1:3794739..3801180
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AA seq
1470 aa
AA seq
DB search
MGRLKLQPGIKSIEEEPEECDSSYSNKATLACMINAEVGAVLAVMRRNVRWGGRYMSGDD
QLEHSLVQSLKSLRKQIFSWQHPWHTINPAVYLQPFLDVIRSDETGAPITGVALSSVYKI
LTLDVIDQNTVNVEDAMHLVVDAVTSCRFEVTDPASEEVVLMKILQVLLSCMKSKASVTL
SNQHVCTIVNTCFRIVHQAGSKGELLQRIARHTMHELVRCIFSHLPDVDNTEHALVNGVS
TVKQEIGGMDNDYTFVNKQSENGNSSSELDGQTSSVSFGSSVSTGLVPTVTEENTIGGSG
KDALPYDLHLMTEPYGVPCMVEIFHFLCSLLNVVEHMGMGPRSNTIAFDEDVPLFALGLI
NSAVELGGPSIRHHPRLLSLIQDELFRNLMQFGLSMSPLILSMVCSIVLNLYHHLSTELK
LQLEAFFACVILRLAQSRYGASYQQQEVAMEALVDFCRQKTFMVEMYANLDCDITCSNVF
EDLANLLSKSAFPVNCPLSAMHILALDGLIAVIQGMAERIGNGSVSSEQAPVNLEEYIPF
WMVKCDDYGDPDHWVPFVRRRKYIKRRLMIGADHFNRDPKKGLEFLQGTHLLPDKLDPQS
VACFFRYTAGLDKNLVGDFLGNHDEFCVQVLHEFAGTFDFQGMNLDTALRLFLETFRLPG
ESQKIQRVLEAFSERYYEQSPQILANKDAALLLSYSLIMLNTDQHNVQVKKKMTEEDFIR
NNRHINGGNDLPREFLSELYHSICRNEIRTTPEQGAGFPEMTPSRWIDLMLKSKKTAPFI
VSDSRAYLDHDMFAIMSGPTIAAISVVFDHAEHEDVYQTCIDGFLAVAKISACHHLEDVL
DDLVVSLCKFTTLLNPSSVEEPVLAFGDDTKARMATVTVFTIANRYGDYIRTGWRNILDC
ILRLHKLGLLPARVASDAADESELSTEPGQGKPITNSLSSVHMQSMGTPRRSSGLMGRFS
QLLSLDTEEPRSQPTEQQLAAHQRTLQTIQKCHVDSIFTESKFLQAESLLQLARALIWAA
GRPQKGNSSPEDEDTAVFCLELLIAITLNNRDRIVLLWQGVYEHIANIVQSTVMPCALVE
KAVFGLLRICQRLLPYKENLADELLRSLQLVLKLDARVADAYCEQITQEVSRLVKANATH
IRSLMGWRTITSLLSITARHPEASEAGFDALLYIMSDGAHLMPANYVLCVDAARQFAESR
VAQAERSVRALDLMAGSVDCLARWSHEAKEAMGEEEAAKLLQDIGEMWLRLVQGLRKVCL
DQREEVRNHALLSLQKCLTIVDGINLPHGLWLQCFDLVIFTMLDDLLEIAQGHSQKDFRN
MDGTLIIAVKLLSRVFLQLLHDLAQLTTFCKLWLGVLSRMEKYLKVKVRGKKSEKLQEVV
PELLKNTLLAMKAEGVLVQRSALGGDSLWELTWLHVNNIAPSLQSEVFPDQDWEQSQHKQ
GETIGSLASDGTGSVPSNGSVASEGSGMGG
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgcttaaagctgcagccaggaattaagtcgatcgaggaagaacctgaggagtgc
gactcttcctactctaacaaggctactttagcatgcatgataaatgcagaagttggtgca
gttttggcagtcatgaggagaaatgttagatggggaggtcgttatatgtctggtgatgat
caactagagcactctttggttcagtccttgaagtcattgcggaagcaaatcttctcatgg
cagcacccatggcatactatcaaccctgctgtgtaccttcagccatttttggatgtgatt
cgatccgatgaaactggtgctccaatcactggggtcgctttgtcatctgtttacaagatt
ttaactcttgatgttattgatcaaaacacagtaaatgtcgaagatgctatgcacttggta
gttgatgctgtcacaagttgcagatttgaggtgacagatcctgcatcagaagaggtagtg
ctgatgaagatacttcaggttcttttatcttgtatgaaaagtaaagcatcagtcacactg
agtaatcagcatgtctgtaccatagtcaatacttgcttccgcatagttcaccaagcagga
agtaaaggagagttgttacagcggattgctcggcacacgatgcacgaacttgttaggtgt
atattttcacaccttccggatgttgacaacacagaacatgcactggttaatggagttagt
actgtcaaacaggagattggtggtatggataatgattacacttttgtgaacaaacagtca
gaaaatggcaacagtagttctgaattggatggtcaaacatcttctgtgagctttggctct
agtgtttctacaggtctggtgccaactgttacagaagaaaatacaattggcggtagcgga
aaggatgcccttccgtatgatttacacctcatgacagaaccatatggtgttccctgcatg
gtcgagattttccactttctgtgctctttgttaaatgttgttgagcatatgggaatgggt
cctagatctaatacaatagcatttgatgaagatgtacctctctttgcattgggattaatt
aattcagctgtagaattgggcgggccttctattcgtcatcaccccaggttattgagtttg
attcaggatgaattatttcgtaatcttatgcagtttggcttgtccatgagcccactgatt
ctctcaatggtttgtagtattgttctcaatctgtatcatcatctaagtactgaactcaaa
ttgcagcttgaggcttttttcgcttgcgtgattttgagacttgcacagagcagatatggt
gcttcttaccagcagcaagaggttgccatggaggctctcgttgacttctgcaggcagaaa
acatttatggtggagatgtatgctaacttagattgtgatataacatgcagtaatgtgttt
gaagacctggctaatctgttgtcgaagagtgcatttccagttaactgccctttgtctgca
atgcacattcttgctttggatggtctcatagctgttattcaggggatggctgaaaggata
ggcaatggatcagttagttcagagcaggctccggtgaacctggaggagtacataccattc
tggatggtgaagtgtgatgactatggcgatccagatcactgggttccatttgtgcgcagg
agaaagtacattaagagaagattgatgattggagctgatcacttcaaccgtgacccgaag
aaaggcctagaatttctccaaggaacacatctcttacctgacaagcttgatccacaaagt
gtggcctgctttttcaggtacactgctgggttagataagaatctagttggggatttcctg
ggaaatcatgatgaattttgcgttcaggttcttcatgaatttgctgggacttttgatttc
caaggtatgaatctggatactgctctgcggttgttcttggagacttttaggcttcctgga
gaatctcaaaaaatacaaagggttcttgaggcattctccgagagatactatgagcaatca
ccgcagattctagctaataaggatgctgctcttttgttatcttattcacttataatgctc
aacacagatcagcataatgtacaggtgaagaaaaagatgacagaggaggattttatacgg
aacaataggcatattaatggaggcaatgacttacctcgagaattcttgtcagaattgtac
cactcaatttgcaggaatgagatccggactactccagaacaaggagctggtttccctgaa
atgaccccgagtcggtggattgatctaatgctcaaatccaagaaaactgctccttttatt
gtatctgattctagagcctaccttgatcatgatatgtttgcaataatgtcaggtcccaca
attgcggctatctcagttgtgtttgatcatgctgaacatgaagatgtttaccagacatgt
attgatggtttcttagctgttgcaaaaatttctgcttgtcatcatcttgaagatgtattg
gatgatctagtcgtgtctctctgtaagttcacaactctcctgaatccatcttctgttgag
gaacctgtgctagcctttggtgatgacacaaaagccaggatggcaactgtgactgttttc
accattgcaaacaggtatggtgattatattcgcacaggctggagaaatattctggattgc
atcttacggttgcacaaactaggtcttcttccagcacgtgttgccagtgatgctgctgat
gaatcagaactttctactgaacccggtcaagggaaacctattacaaattctctatcttca
gttcatatgcaatctatgggaactcctaggagatcttctggattgatgggccggtttagt
cagctcttatctcttgacactgaggagccaagatcacaacctactgagcaacaacttgct
gctcatcaacgcacccttcagacaattcaaaagtgccatgtcgacagcatatttactgag
agcaagttcttgcaagctgaatctttattacagctcgcacgagctctcatctgggcagca
gggcgaccccagaaagggaacagctctccagaggatgaagatactgcagttttctgcctg
gagttgttgattgcaattactctgaataaccgtgacaggattgtgctattatggcagggt
gtttatgagcacatagctaatattgttcaatcaactgtaatgccttgtgcattagtagag
aaggctgtgtttggactcctccggatttgccagcggttgctcccctataaagagaacctg
gctgatgaacttttgaggtccttgcaacttgttttgaagcttgatgcccgtgttgctgat
gcttactgtgaacaaattacacaggaagtcagtcgccttgtaaaggcaaatgctacgcat
atcagatctttaatgggatggcgtacaattacatccctgctttccataacagctcggcac
cctgaagcttctgaagctggatttgatgcactgctgtacattatgagtgatggagctcac
ttgatgccagccaactatgttctttgtgttgatgcagcaaggcagtttgcagagtctcgt
gtggcacaggcagagaggtctgtacgtgcactagatcttatggcgggttccgttgattgt
ttggctcggtggtctcatgaggctaaggaagcaatgggggaggaggaagctgcgaaattg
ttacaggacattggggagatgtggctgaggcttgtacagggactaagaaaagtttgtttg
gatcagagagaagaggtcagaaaccatgcacttttgtcattgcagaaatgcttgacaata
gtggatgggatcaatcttccacatggtttgtggctacagtgttttgatctggtgatcttt
acaatgcttgacgacttgcttgaaattgctcagggacactcccaaaaagatttcagaaac
atggatggtacactaattattgctgtaaagctcctgtcaagagtgtttttacagctactc
catgaccttgctcagttaacaactttctgtaagctatggctgggagtgctcagccgaatg
gagaaatatctgaaggttaaagtaagagggaaaaagagcgagaagcttcaggaagtagtg
cctgagcttttgaagaacaccttgcttgcaatgaaggccgagggagtgctagttcagagg
agtgccttaggtggggatagcttgtgggaactaacatggctgcatgtgaataacattgct
ccatctttacaatctgaggtgttcccagatcaagactgggagcagtctcagcacaagcag
ggtgaaacaattggtagtttggcatctgatggaacgggttctgttccatcaaatggatca
gtggcttctgaaggttctggaatgggaggttaa
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