Entry |
|
Name |
(RefSeq) THO complex subunit 4A
|
KO |
|
Organism |
rcu Ricinus communis (castor bean)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:rcu00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
8281889
09122 Translation
03013 Nucleocytoplasmic transport
8281889
03015 mRNA surveillance pathway
8281889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:rcu03019]
8281889
03041 Spliceosome [BR:rcu03041]
8281889
Messenger RNA biogenesis [BR:rcu03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
8281889
TREX complex
8281889
Spliceosome [BR:rcu03041]
Complex C
Other components
EJC/TREX
8281889
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
8281889
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
8:17863215..17865767
|
AA seq |
247 aa
MSSALDMSLDDIIKSNKKPGSGNSRGRGRSSGPGPTRRFNNRGTNRAAPYAAAKAPESTW
QHDMFTDQGGMGMFQGQGGGGSRASGIETGTKLYISNLEYGVSNEDIKELFSEVGDLKRY
SIHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVGTNIATPAATPAAN
GNFGNSNGAPRGGQGRGGTMRRPRGASSDGRGFGRGRGRGRGRGEKVSAEDLDADLEKYH
SEAMQTN |
NT seq |
744 nt +upstreamnt +downstreamnt
atgtcaagcgccttggatatgtcacttgacgatatcataaagagcaataagaagcctgga
tccggtaactcccgaggccgtggccgttcttccggccccggtccgactcggcggtttaat
aatcgcggcactaatcgagccgctccctatgctgcagctaaggcgcctgaatctacctgg
cagcacgacatgtttacagatcaaggtggaatgggaatgtttcaaggacaaggtggcggt
ggtagtagggcctctgggatcgagactggaactaagctttacatctctaatctcgagtat
ggtgtttctaacgaggacattaaggagttgttttctgaagttggtgatttgaagcggtac
tcaatccattatgacaggagcgggagatcgaagggaacagcagaagttgtcttttcacga
cgtacagatgctttagctgctgtcaagagatacaacaatgttcagcttgatggaaaacct
atgaagatagagattgttggaacaaatattgctactcctgctgcaaccccagctgctaat
ggcaattttggaaattcaaacggagctcctagagggggacaaggaagaggtggcacaatg
agaagaccacgtggggccagtagtgatggccgtggatttggaaggggtcgtgggcgtgga
aggggtcgtggtgaaaaggtttcagcagaagatcttgatgctgatctggagaagtatcat
tcagaagcgatgcagaccaattaa |