KEGG   Ricinus communis (castor bean): 8281889
Entry
8281889           CDS       T01087                                 
Name
(RefSeq) THO complex subunit 4A
  KO
K12881  THO complex subunit 4
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03013  Nucleocytoplasmic transport
rcu03015  mRNA surveillance pathway
rcu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    8281889
  09122 Translation
   03013 Nucleocytoplasmic transport
    8281889
   03015 mRNA surveillance pathway
    8281889
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rcu03019]
    8281889
   03041 Spliceosome [BR:rcu03041]
    8281889
Messenger RNA biogenesis [BR:rcu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     8281889
    TREX complex
     8281889
Spliceosome [BR:rcu03041]
 Complex C
  Other components
   EJC/TREX
    8281889
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    8281889
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_3
Other DBs
NCBI-GeneID: 8281889
NCBI-ProteinID: XP_002531375
UniProt: B9SZF6
LinkDB
Position
8:17863215..17865767
AA seq 247 aa
MSSALDMSLDDIIKSNKKPGSGNSRGRGRSSGPGPTRRFNNRGTNRAAPYAAAKAPESTW
QHDMFTDQGGMGMFQGQGGGGSRASGIETGTKLYISNLEYGVSNEDIKELFSEVGDLKRY
SIHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDGKPMKIEIVGTNIATPAATPAAN
GNFGNSNGAPRGGQGRGGTMRRPRGASSDGRGFGRGRGRGRGRGEKVSAEDLDADLEKYH
SEAMQTN
NT seq 744 nt   +upstreamnt  +downstreamnt
atgtcaagcgccttggatatgtcacttgacgatatcataaagagcaataagaagcctgga
tccggtaactcccgaggccgtggccgttcttccggccccggtccgactcggcggtttaat
aatcgcggcactaatcgagccgctccctatgctgcagctaaggcgcctgaatctacctgg
cagcacgacatgtttacagatcaaggtggaatgggaatgtttcaaggacaaggtggcggt
ggtagtagggcctctgggatcgagactggaactaagctttacatctctaatctcgagtat
ggtgtttctaacgaggacattaaggagttgttttctgaagttggtgatttgaagcggtac
tcaatccattatgacaggagcgggagatcgaagggaacagcagaagttgtcttttcacga
cgtacagatgctttagctgctgtcaagagatacaacaatgttcagcttgatggaaaacct
atgaagatagagattgttggaacaaatattgctactcctgctgcaaccccagctgctaat
ggcaattttggaaattcaaacggagctcctagagggggacaaggaagaggtggcacaatg
agaagaccacgtggggccagtagtgatggccgtggatttggaaggggtcgtgggcgtgga
aggggtcgtggtgaaaaggtttcagcagaagatcttgatgctgatctggagaagtatcat
tcagaagcgatgcagaccaattaa

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