Ricinus communis (castor bean): 8281907
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Entry
8281907 CDS
T01087
Name
(RefSeq) probable oxidosqualene cyclase isoform X1
KO
K01853
cycloartenol synthase [EC:
5.4.99.8
]
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu00100
Steroid biosynthesis
rcu01100
Metabolic pathways
rcu01110
Biosynthesis of secondary metabolites
Module
rcu_M00917
Phytosterol biosynthesis, squalene 2,3-epoxide => campesterol/sitosterol
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
8281907
Enzymes [BR:
rcu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.8 cycloartenol synthase
8281907
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Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
Pec_lyase
TED_complement
Motif
Other DBs
NCBI-GeneID:
8281907
NCBI-ProteinID:
XP_048226508
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Position
2:31207342..31225132
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AA seq
763 aa
AA seq
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MWKLKVSSEEGNGEERIGSCNNSVGRQYWEFDTNLGNLEERAVVEKLRHEFTSNRFQVKQ
SSDLLMRLQFKKEKGCEMKREMMKVKSEEEITEEVVDSTLKRALKFYSTLQTDDGFWPSD
YGGPLFLLPGLVISLYVSGVLNVILPDHHQQEIRRYMLNHQNEDGGWGLHIEGSSTMFCT
ALSYVTLRLLGEKMDGGNGAMEKARKWILDHGGVTYIPSWGKMWLSVLGVYDWSGNNPLP
PEIWLLPYFVPLHPGRLWCHSRMVYLAMSYLYGKRFVGPINRLILSIRRELYLLPYYLID
WNQARSLCAKEDLYYPHPLIQDILWGFLHKVGEPLLTKWPFSRLRPLALNTIMQHIHFED
ESTHYICLGPVNKVLNMLCCWVEDPNSEAYKCHLPRIKDYLWMAEDGMKMQGYNGSQLWD
VAFAVQAILATNLFEEHSSMLKKAYNFIKNTQVRRNCSDNLSKWYRHITKGAWPFSTPDN
GWPVSDCTAEALKAAILLSQMPPDVVGEAIPADRLFDAVDVILSLQNKNGGFASYELTRS
YAWLEMINPAELFGDIMIDYQYVECTSAAIQGLKSFMTLYPGHRRKEIEACLTKAVGFIE
STQQPDGSWYGSWGICYIYGTWFGIKGLVAGGKKYYNSPSIRKACNFLLSKQLASGGWGE
SYLSSQNKVYTNLECNKSHNVSTGWAMLALIEAGQAERDPYPLHRAAKVLINSMLETGDF
PQQEIMGVFNKNCMINYSNYRNIFPIWALGEYLKHVILPSKGH
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagctgaaggtatcatcagaagaagggaatggtgaagagagaattggaagttgc
aataatagtgttgggagacaatattgggagtttgatacaaatcttggaaatcttgaagaa
agagctgttgttgaaaagcttagacatgaattcaccagtaacaggtttcaagttaaacaa
agttctgatctcctaatgagacttcagtttaaaaaggagaaaggttgtgagatgaaaaga
gaaatgatgaaagtgaaaagtgaagaagagataacagaggaagtggtggattcaacattg
aaaagggccctcaaattttactcaactctacagactgatgatgggttctggcccagtgac
tatggcggccctttgtttcttctcccaggtttggtgattagtttatatgtgagcggtgtc
ctaaatgtcatattgcctgaccaccaccaacaagaaatccgtcgttatatgcttaaccac
cagaatgaagatggagggtggggattacatatagaagggtccagcacaatgttctgcact
gctttatcatatgtaacgctgagattgctgggggagaaaatggacggtgggaatggtgcc
atggagaaagccagaaaatggatccttgatcatggtggggtcacttacattccttcctgg
gggaagatgtggctttctgttcttggagtatatgactggagtgggaataatccgttgccc
ccagagatctggcttcttccctactttgttcccttgcatccagggcggttatggtgtcac
tctaggatggtgtatcttgcaatgtcttatttatatgggaaaagatttgtgggtccaatc
aatagacttattttatcaattaggagagagctctatcttcttccctattacctcattgat
tggaaccaagctagatctctttgtgccaaggaagacttgtactatccacatcctctgatc
caagacattttatggggctttcttcataaggttggggagccacttctcaccaagtggcct
ttctcaaggctaagaccattggctttaaatactattatgcaacatattcattttgaggat
gaaagcactcattatatatgccttggccctgttaataaggttctaaacatgctttgttgt
tgggttgaggatccaaattcagaggcatataagtgtcatctcccaagaatcaaagattat
ttgtggatggctgaagatggtatgaaaatgcagggttataatggttctcaattgtgggat
gttgcttttgctgttcaagcaatccttgctaccaacctttttgaagaacacagttctatg
ctcaagaaagcctacaattttattaaaaatacacaagttaggagaaattgctctgataat
ttaagtaaatggtaccgacacattactaagggggcatggcctttttcaacaccggataat
ggttggccggtttcagattgtacagctgaagctctcaaggctgcaattttattatctcaa
atgccaccagatgttgtaggagaagcgataccagctgatcgattatttgatgctgttgat
gtgatattatcattacaaaacaaaaatggaggttttgcttcgtatgagctcaccagatct
tatgcttggttagagatgattaacccagctgaactatttggagatatcatgatagactat
cagtatgtggaatgcacatcagctgcaattcaaggcttgaaatcattcatgacattgtat
ccagggcatagaagaaaagaaatagaagcatgtcttaccaaggcagtaggcttcattgag
agtacacaacagcctgatggctcatggtatggatcatggggaatttgctacatatatgga
acttggtttggaataaaaggattagtagctggtggaaagaagtactacaatagtcctagc
atcagaaaagcttgtaatttcttactatctaagcaacttgcctctggtggttggggagaa
agctacctttcaagtcaaaacaaggtgtatactaatttggaatgcaataaatcacataat
gtaagcaccggatgggcaatgttagctcttattgaagctgggcaggccgaaagagatcca
tatcctttgcatcgtgcagcaaaggtattgattaattcgatgctggaaaccggagatttc
ccacaacaggaaatcatgggagtctttaacaagaattgtatgatcaattactccaattat
aggaatatttttcctatttgggcccttggagagtatctcaaacatgtcatattgccttct
aaaggccattaa
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