Ricinus communis (castor bean): 8282067
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Entry
8282067 CDS
T01087
Name
(RefSeq) LOW QUALITY PROTEIN: replication protein A 32 kDa subunit A
KO
K10739
replication factor A2
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03030
DNA replication
rcu03420
Nucleotide excision repair
rcu03430
Mismatch repair
rcu03440
Homologous recombination
rcu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
8282067
03420 Nucleotide excision repair
8282067
03430 Mismatch repair
8282067
03440 Homologous recombination
8282067
03460 Fanconi anemia pathway
8282067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rcu03032
]
8282067
03400 DNA repair and recombination proteins [BR:
rcu03400
]
8282067
DNA replication proteins [BR:
rcu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
8282067
DNA repair and recombination proteins [BR:
rcu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
8282067
MMR (mismatch excision repair)
8282067
DSBR (double strand breaks repair)
HR (homologous recombination)
8282067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
tRNA_anti-codon
RMI2
TrmB
RNA_pol_Rpc34
DDRGK
MCM_WH_arc
HTH_24
Motif
Other DBs
NCBI-GeneID:
8282067
NCBI-ProteinID:
XP_048228419
LinkDB
All DBs
Position
3:33063099..33066158
Genome browser
AA seq
291 aa
AA seq
DB search
MFSSSQFESFSGGGFMSSQSSQPTDSAPSPAKSRDSQGLVPVTVKQISQASHSGDENSNY
VIDGVDVTNVTVVGMVFDKAQNVTDVNFTVDDGTGRIGCKRWVNENFDSSEMETIQDGMY
VRVSGHLRSFQGVRQLGAFSVRPVMNFDEVTFHFIDCIHTHLLNSKSQLQGGASIQTQNV
ESSTSTQTSNSIQFTKQYSVDGLKDCDQLVLDYLQQSSSMGQEKGIHMDELSQQLKLPMD
KIKETIRSLEDEGLIYSTIDEFHYKXNLMKLIIMLSGLWMVRFAISRSSKA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgttctccagcagccaattcgaatccttttccggcggtggatttatgtcttcgcagtca
agtcagccaaccgattcggctccatcccctgcaaaaagtcgtgattctcagggtttggta
ccggtaacagtgaagcagataagtcaggcttctcattctggtgatgaaaattcaaattac
gtgatcgatggcgtggatgtgaccaacgttactgtggttgggatggtgtttgataaagct
caaaacgtaaccgatgttaatttcaccgtggatgacggaacaggccgaattggttgtaaa
agatgggtgaacgagaattttgacagctcggaaatggagacgatacaagatggaatgtac
gttcgtgttagtgggcatctgagaagttttcaaggcgtaagacagttgggtgctttctct
gtgaggccagtaatgaactttgatgaggttactttccactttattgactgcatacacacc
catttgctgaactctaagtcacagctgcaaggtggtgcctcaattcagactcagaatgta
gaatcatccacgagcactcagacatctaactctatccaattcaccaagcaatacagcgtt
gatggactaaaggactgtgatcaactggtcctcgactatctgcaacaatcttcaagcatg
gggcaggaaaaggggatacacatggatgaacttagccagcagctaaagcttcccatggat
aagatcaaggaaactattagatctctcgaagatgaaggcctgatatactctacaatcgat
gaatttcactataaangcaacctgatgaagctgataatcatgttgtctgggttatggatg
gttcgtttcgctataagccgaagcagcaaagcctaa
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