Ricinus communis (castor bean): 8282148
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Entry
8282148 CDS
T01087
Name
(RefSeq) nuclear pore complex protein NUP214 isoform X1
KO
K14317
nuclear pore complex protein Nup214
Organism
rcu
Ricinus communis (castor bean)
Pathway
rcu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
8282148
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcu03019
]
8282148
Messenger RNA biogenesis [BR:
rcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
8282148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAPA-1
Motif
Other DBs
NCBI-GeneID:
8282148
NCBI-ProteinID:
XP_015577414
LinkDB
All DBs
Position
9:23101347..23116169
Genome browser
AA seq
1823 aa
AA seq
DB search
MGAEDEESLIQARKIEIEQDVEGDRVDSGDYFFNRIGKPIPILNDQSESPLFDLQSPPSS
PLAVSPQHGLIFLVHSSGFYVARTKDVMDAAEEIKGTSPCIQDLSIADVPIGKPHILSLS
FDSSTLVVTVAAHLHFFLVDSLLNKEVKPFFSCSLSEPTSFVKDFKWRRRSDSSYLLLSN
HGNLYHAAVLDSPLKLVMDDVDAVEWSLKGTYLAVAKAHILHILSSNFKERLRLSLPFKS
WIADSDDSCSVKVDSIRWVRPDSIVVGCFQQTADGKEENYLVQVIRSKDGKITDTSSEPY
VLSYYDLFSGLIDDILPYGNGPYLLLSYLHECGLAITANRKNTDQHVLLLCWSVEDGMSE
TAIVDIDRDTWIPRIELQGNGDDNLIMGFSVDNVSIYAKVEVEVGLEQRELSPFCVLFCV
TLEGKLVMFYVASAAGTTLPPDADSALDDEEEDSLPESLAGRVQSNILSGPEQVALGLQV
NDVSKREPDVSKGSELSTNKDLPSGDTRSSMTALITEQKPHKGATSEAQEMESVLNSKPS
VFDCQDKASTTKMYQGVDGQQVQFFGQQRANLGQSKNSPSEGPNYFVKHLTETDNKIFSE
FRPGTASFLEKAPPVPSQVNGKGLQKSANLPKDSRVIFGSPGLHGAPSQPWSSEKVICSG
GSDSKTSALTSTLIQGHKSDNTGLSVDAANVPLNLAGKPFHLKGNIGDTPSANFSVRPTH
TVVQKAKTGMIDLLPSIRSSQLPSQESLALGRSGNRWPYSSKDAHKAPSLSKSEPYLSRQ
FGNIKEMAKELDSLLECIEEPGGFKDACTISQRGSVEALEERMQTLSEKCITWKSMMDEQ
LGEVQHLLDKTVQVLARKIYMDGIVKQASDSRYWELWNRQKLGSEFELKRRHILKLNQVL
TNQLIDLERHFNTLELHKFDENGGVPKGRREFQSRHGPSRQIQSLHSLYNTTNSQLAAAE
HLSECLSKQMAVLSVESPVKQKNIKKELFETIGIPYETTFSSPDSTKVGDSSSSMKLLLS
GSASNKSQSRRRQLSVMKSSDSETARRRRDSLDQSWASFEPKKTTVKRVLLQETQKTSVS
KSSLMDRQQLDNSVVDSSAVNHPKDLTPPSTLTYPSGNKGIQFTFQKQALDKKPTPSRWA
SDSLPPSQSTAQATGLRPPMLGSGAALPSISPYQALPITGQILSRETGIVTSDELSGTGS
TGKSDSLLTHESKSIQQSETNLHKKSSVSMELPAQAPTLMKSNEMLNCNAKGAGLANSRM
ATMSHVPTNTKVPQFSVAASRSQPSEKASSSQAFSMPLSFSSSPVINSSFGISLINSKDK
VDATQTVLMTPFSSVSSPVFPSGSFSLQAPKSPLPMHTPPAVSESRKTELQSATDKMPPP
VNPALRSISESVKTEAQIPTVNTSLPNSPTPSPSVSISHKPGLQSPTGKTSPSTGPTSPL
TSEPSKSQLQPLSDKFNSGTTTTAPKTQPEPPAFSLKLETPVSSVPASEISTGLGSGSQS
SLNSMASPASGIQLNVQPTFGAPLASDSMASGKNANMDLAVTEEDEMEEEAPEASRTNEI
SLGSFGLGSTPASTAPRANPFGNIVTNQASSSFTMTVPSGELFKPASFSFQSPLPLQPSP
PSNMGTFSGGYAANAVAQAPAPNAFAQPAQMGAGQQALGSVLGSFGQSRQFGAGLTGGFA
SASSMGGFSSAATGGGFAAAATGGGFASLVSGGFGGFAGVASGGGGFGGVASGGGGFGGV
ASGGGGFGGVASGGGGFAGGAGGGFAAAGGGFGAFNSQQGAGGFSAFSGNTGSNQQGSGG
FSAFSGSTGGTGKPPELFTQMRK
NT seq
5472 nt
NT seq
+upstream
nt +downstream
nt
atgggagcagaagatgaagaaagcttaatacaagcaagaaagatagaaatagaacaagat
gttgaaggtgaccgtgtggattccggagattacttcttcaataggatcgggaaacccatt
cccatcctcaacgaccagtcagagtctcctcttttcgatttacagtcccctccctcttct
cctctggccgtctccccgcaacacggcctcatctttcttgttcattcttcaggattttat
gttgccagaaccaaggatgttatggatgcagctgaggagattaagggaacttctccttgt
atacaagatttgagtattgctgatgttcccattggcaaacctcacattctttccctctct
tttgattcttctactcttgtcgttaccgttgctgctcatcttcatttctttctcgttgat
tctcttctcaataaggaagtaaagccatttttctcttgttcattgagcgaaccaacttct
tttgttaaggatttcaaatggagaaggagatcagattcttcttaccttcttctttctaac
catggtaacctatatcatgctgctgttcttgattctcctcttaaacttgtaatggacgac
gtagatgctgttgaatggagtttaaaaggaacatatttagctgtggctaaagcgcatatt
ctccatattttgtcttctaatttcaaggaaagattgcgtctttccttgcccttcaagtct
tggattgctgattctgatgacagctgcagtgttaaagtggattctatcaggtgggtgcgt
cctgatagcattgttgttggatgctttcaacaaactgcagatggaaaggaagaaaattac
cttgttcaagttatcaggagcaaagatggcaaaattactgatacttcttcagagccatat
gtgctatcctactatgacttattttctggtctaattgatgacattctgccctatggaaat
ggaccttacttacttttgagctatttacatgaatgtgggcttgcgattacagcaaacagg
aagaatacagatcagcatgttctgttactttgttggtcggtagaggatggcatgagtgaa
actgcaattgttgatattgatcgagatacttggatcccgaggattgagcttcaaggtaat
ggcgatgataatttgatcatggggttttctgttgataatgtttccatctatgcaaaagtt
gaggttgaagttggtcttgaacagagagaactttcaccattttgtgttcttttctgtgtt
actcttgaggggaagcttgttatgttttatgtagcaagtgctgcaggaactaccttacca
cctgatgctgactcagcccttgatgatgaagaagaggattctttgccggaatcacttgca
ggacgtgttcaatccaatattctatctggaccggaacaggtggccttgggtcttcaagtg
aatgatgtgagcaaaagggagccagatgtttctaaaggtagtgaactttcaacaaataaa
gacctgccttctggtgacaccaggagttcaatgactgcacttattacagagcaaaaaccc
cataaaggtgctacctctgaagcacaggagatggagtctgtattaaactctaaaccttct
gtatttgattgccaagacaaagcttctaccacaaagatgtaccaaggtgtagatggccaa
caagtacagtttttcgggcagcaacgtgcaaacctgggacagtctaagaattcaccctca
gaggggccgaattattttgtcaagcatctgactgaaacagacaacaaaatatttagtgaa
ttcagacctggtactgcttcttttcttgagaaagctcctccagtccccagccaagtaaac
ggtaagggtttacaaaaaagtgccaacctacctaaggactcacgagttatatttggttca
cctggtttacatggtgcgccatctcagccatggtcaagtgaaaaggttatatgttcaggg
ggctctgatagcaaaacttcagctttaacttctactttaattcaagggcataaatctgat
aatactggtttaagtgttgatgcggcaaatgttcctctgaaccttgctggaaaacctttt
catctgaagggtaatattggtgatactccttcagccaacttttctgttagaccaacccac
actgtcgtccagaaagcaaagactgggatgattgatttgttgccttctattcgtagctcg
cagttgccatctcaggaatctcttgcactgggaaggtctggcaaccgttggccttactct
tcaaaggatgcacacaaagctccatctctatcgaaatctgagccatatttatcaagacaa
tttggcaatattaaagaaatggccaaagagttggattcacttttggaatgtattgaagaa
ccagggggcttcaaggatgcctgcactatttcccaaagaggttcagttgaagctttggag
gagcgcatgcaaactctttctgaaaaatgcataacatggaagagcatgatggatgaacag
cttggagaagtccagcatcttctagataaaactgtacaagttttggcaaggaaaatatat
atggatggtattgtcaagcaagcctctgatagccgttattgggaactttggaatcgccaa
aagttggggtctgaatttgagctaaagagacgccatatattgaaattgaatcaggttctg
accaatcagttaattgatttggagaggcacttcaatacccttgaactccataagtttgat
gaaaatggcggagttcctaaaggtcggagggaatttcaaagtcgacatgggccttcaaga
caaattcagtccctgcatagtttatataacacgacaaattcacaactagcagctgcagaa
cacctttcagaatgtctgtcgaaacaaatggctgtactgagtgtagaatcacctgtgaaa
caaaagaatataaagaaggaactgtttgagacaattggaatcccttatgagaccactttc
agctctccggattcaacaaaagttggcgattcctcctcatcgatgaaacttctactttct
ggttctgcgtctaacaaatctcagtccagaagacgtcagttaagtgttatgaaaagttct
gattcagaaactgcaagaagaaggagggactcgctagatcagagctgggctagttttgag
cccaaaaaaacaactgtaaagagggtgcttttgcaagaaactcagaagacaagtgtgagt
aaatcatccttgatggataggcaacaacttgacaattctgtggtggatagctcagcagtc
aatcacccaaaggacctgacacctccttcaaccctcacgtatccatctggaaataaagga
attcagtttacattccaaaaacaggctttggataaaaaaccaacgccatctagatgggct
agcgactctctgccaccatctcaatctacggctcaagcaacagggttgaggcctcctatg
ttgggtagtggtgctgcactaccatcaatttcaccataccaagcactgcccataacgggt
caaattctttccagggaaactggcattgttacatcagatgaattaagtggtacgggttct
actgggaagtctgattctctgctgacccatgagagcaagtcaattcagcaatctgaaact
aatctgcataaaaaatcatcagtgtcaatggaattacctgcacaggcaccaactttgatg
aaatcaaatgagatgcttaattgcaatgcaaagggggctggacttgcaaattcaaggatg
gcaactatgagtcatgtaccaacaaatacaaaagttccgcagttcagtgttgcagctagc
agaagccagcctagtgaaaaagcatcatcttctcaggcattctcaatgcctctttcattt
tcttcatctccagtgatcaattcatcatttggcatatctttgatcaattctaaagacaaa
gttgatgctactcaaacagttcttatgacacccttttcatcagtttcttctccagttttt
ccttctggttccttctctcttcaggctcccaagtcaccgcttcccatgcatactccacct
gcagtttcagagtctcgtaagacagagcttcaatctgctactgacaaaatgccacctcct
gtgaatccagccctgcgatcaatatcggagtcggttaaaacagaggctcaaattcctaca
gtcaatacttcacttcctaatagcccaactccttcaccttcagtgtcaatctctcataaa
ccagggcttcaatcccctaccggcaagacttcaccttccactggtcctacttctcctttg
acatcagaaccttctaaatctcagctgcaacctttgtcagacaaatttaactcaggtact
actacaacagctccaaagacacagcccgaacctcctgcatttagtttgaagcttgaaact
ccagtatcatctgtccctgcatctgaaatatcaactgggctggggtctggaagtcagtcc
agtctgaacagcatggcaagtcctgcatctggaatacaactgaatgtgcagcctactttt
ggggcaccactagcttctgatagtatggcaagtggaaagaatgcaaacatggatctcgca
gtgacagaagaggatgaaatggaggaggaggctcctgaggcaagccgcacaaacgaaatt
agtttgggtagttttggtcttggatcaacccctgcctcaactgctcctagagcaaatcca
tttggtaatatagtaacaaatcaagcaagctcttcgttcacgatgactgtacctagtgga
gaactctttaagcctgcatcatttagctttcaatctccattgcctttacaaccgtctcct
ccatcaaatatgggtacattctctggtggttatgctgctaatgcagttgctcaagcccct
gcacctaatgcatttgcccagcctgcgcagatgggagcaggacaacaagcactaggatca
gttcttggttcttttggacagtcgagacagtttggcgctggtctaactggtggctttgct
agtgccagttcaatgggtggcttttcaagtgctgccactggtggtgggtttgctgctgcc
gctactggcggtggcttcgctagtttggtctccgggggatttggtggatttgctggtgta
gcttcaggtggcgggggatttggtggtgtggcttcaggtggcgggggatttggtggtgtg
gcttcaggtggcggaggatttggtggtgtggcttcaggtggtggagggtttgcaggaggt
gctggtggtggatttgctgcagcaggtggtggatttggggctttcaacagccagcaggga
gctggtggtttctcagcattcagtggtaacacaggcagcaaccaacaaggaagtggtggc
ttctcagctttcagtggcagtacaggaggaactgggaaacctccggaactcttcacacaa
atgagaaaatag
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