Ricinus communis (castor bean): 8282153
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Entry
8282153 CDS
T01087
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
rcu
Ricinus communis (castor bean)
Brite
KEGG Orthology (KO) [BR:
rcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rcu04131
]
8282153
04121 Ubiquitin system [BR:
rcu04121
]
8282153
Enzymes [BR:
rcu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
8282153
Membrane trafficking [BR:
rcu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
8282153
Ubiquitin system [BR:
rcu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
8282153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-ANAPC11
zf-RING_UBOX
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
8282153
NCBI-ProteinID:
XP_048235400
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All DBs
Position
9:23143831..23146372
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AA seq
394 aa
AA seq
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MEEALAARYWCYLCSQMVNPIMEAEIKCPFCLGGFVEEMSSNTRDNQEPDSDFSSDRALS
LWAPILLGMMGNPRRRRRLRRREFEEDDDDNDDGETRHGGEIDIDRELESFMRRRRRSSA
TILQLLQGIRAGMASESENSEGDRDRDGDRDRERDRERDRVILINPSNRTIIFQGSYDSS
NGQGQNNAPIGSLGDYFIGPGLDLLLQHLAENDPNRYGTPPAQKEAIEALPTVTIKNTSQ
CSVCLDDFEIGTEAKEMPCKHRFHDVCILPWLELHSSCPVCRFQLPAEESKFDSAERLQN
HSDQRGSYNNNISTTTSSNNINNNDDDDNNHSSNIEEGEGEGRNGNGRRFSFLWPFNSLF
SSSSGSQSGGSNSSSNLSSSLGNAPGSSSQTDEN
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagcattggcagcacggtattggtgttacttgtgctctcaaatggtgaatccc
attatggaagctgagatcaaatgtccattttgtcttggtggatttgtagaagaaatgagt
agtaacacaagggacaatcaggagcctgattctgattttagttctgatcgtgccctctcc
ctctgggccccaatcttgcttggaatgatgggaaatccccgtcgcagaagaagattaagg
agaagggaatttgaagaagatgatgatgataatgatgatggtgagacacgacatggagga
gagattgatatagaccgtgaacttgagtcattcatgaggagaaggagaagaagctcagct
acaatattacaattgcttcaaggaattcgagcgggaatggcatcagaatcagagaattct
gaaggagatagggatagagatggagatagagatagggaaagagatagggaaagagaccgc
gtcattttgattaatccgtcgaatcgaactatcatttttcagggttcatatgattctagc
aatggtcaaggccagaataatgctcccattgggtcattaggtgattatttcataggacct
ggtctggatttgttattgcaacatttggctgagaatgatccaaatagatacggaactcca
cctgcccagaaggaagccattgaggcattgcctactgtgaccataaagaatacttcacaa
tgttcagtatgtttggatgattttgagattggcactgaggcaaaggaaatgccatgtaag
cataggtttcatgatgtgtgcatactgccatggctggaacttcatagttcttgcccagtt
tgcaggtttcagttgcctgctgaagagtccaagttcgattctgctgagaggttgcagaat
cacagtgatcagaggggaagctataataataatatcagtaccaccaccagcagcaataat
attaataataatgatgatgatgataataatcacagtagtaacattgaagagggagaaggt
gaggggagaaatgggaatggaagaaggttttcctttctatggccttttaatagtttgttc
tcatcatcctcaggatctcaatctggtggaagcaattcatcctcaaatttatcatcctct
ttgggaaatgctcctggaagctcttctcaaacagatgagaattga
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